XB-CLONE-3644316
Clone Name: IMAGE:7658283
|
Gene:
epb41l1
|
Species: Xenopus tropicalis
|
|
|
Sequence:
Full length sequence: BC154075
[+]
GGGATTGGCTGCAGAATAGCCCCCTTCCCTCTGCCCCCACCCTCCCATTCTGCCCATTGCATTGTGCCCCCCTCGCCCATCGCTGCCTGCGGAGGGTGCC
CCGGAGGATCTCTATGGCCGGTTGAGGGTAACCCACTCCCCCTTGGATCCTCGCTGCTGACAGCTCCTGCTTGATCAGACTGAGCAGTCACCATGACGAC
AGAACTGGGGTCAGAGACAGAACTTTCTCCTGGCCCCGAGGGCCCAGCGCAAGACGGAGTCCCTAATCCTGCACTAAATGCCCAAGATGCCTCCTATGCA
CCCGCTAACAATGTGGAGAGGCCAGGAGCCGGCGAAAACGCACGAAGACCCGGGGAGGGAGAAGAGAGAGCGGACTTGGCCTCAGAGCGAACAACACCCA
CCCACATGCAGCGATCACCCCAAAAACATTCCAGGAAACCCAAGAGTGCTCTTTGCAGGGTAACACTGTTGGATTCTTCCAACTATGAGTGTGAGATAGA
GAAGCACGCTCGAGGGCAGGTCCTGTTCGATACTGTGTGCGGGCATCTCAACCTTCTGGAAAAAGATTACTTTGGCCTGACGTTCTGCGATACCGACAGT
CAAAAGAACTGGCTGGACCCTTCCAAAGAAATAAAGAAGCAGATCAAAAGTGGTGCGTGGACGTTCGGCTTCACCGTAAAGTTTTATCCTCCGGACCCTT
CCCAGCTTACAGAGGATATTACAAGGTATTACCTATGCCTGCAGCTACGCGCTGACATCATCAGTGGGCGCCTTCCGTGCTCCTTTGTCACACACGCCCT
GCTTGGCTCGTACACTGTCCAGGCTGAATTGGGTGACTACGATCCCGAGGAGAATCATGGGAACTACGTTAGCGAGCTGCGCTTCTCCCCTAACCAGACG
CGAGAGCTGGAGGAGAGAATAATGGAACTGCACAAAACGTACAGGGGGATGACTCCAGCAGAAGCTGAGATTCATTTTCTAGAAAATGCCAAGAAGCTCT
CTATGTATGGAGTGGACCTACATCATGCCAAGGACTCCGAGGGGATTGATATCATGCTGGGAGTTTGTGCCAATGGGCTTTTGATCTACAGAGACCGGCT
GCGAATCAACCGCTTTGCTTGGCCCAAAATCCTCAAGATTTCCTACAAACGGAGCAACTTTTACATTAAAATACGGCCGGGGGAGTACGAGCAATTTGAA
AGCACCATTGGGTTCAAGCTGCCCAATCATCGAGCCGCAAAGCGTTTGTGGAAGGTTTGCATAGAACACCACACATTCTTTAGGCTTGTGTCCCCAGAAC
CAGCACCAAAGGGATTCCTAGTGATGGGGTCAAAGTTCCGTTACAGTGGGCGCACACAGGCACAGACCCAACAGGCAAGCGCCCTCATAGACCGCCCGGC
TCCCAACTTTAAACGTTCTTCTAGCAAACGATACACCCTGTCTCAAAGCCAGGAAGGAGGGTTCTCACGGCCGACTGCTGTAAACGAGAACCACGAATCT
TCACCGGAGAAAAACCACGAAGACCACGGGGAAGAGCTGGACAGGGAAGAGGGGCAGGAAGAGGTGACGACACCAACCAAAATCAAGGAACTAAAGTTCC
TAGACAAGTCTGAGGATGTCCTGCTGAAACATCAGGCCAGTATTAATGAACTGAAAAGAACCTTGAAACAACCAAACAGCAAATTGGTCCACAGAGAAAG
GGGGAGGGAGAAGAGATTGCCTTCCTCACCCACTTCCTCATCCCCTAAACCAGAGGATGGAGAGGACGCAGTGAAACATGTTGAAGACGAGGCTGACGGT
GCTGCTATCCAGGACTCGGAGGTTTTCACCCAGAAAAGCCTTGCCTCCTCCCCTGAGAGAGTGAGCAGCAGGGAGACAGAAGAGCCACGGGGCACAGGCG
AAGAGGAACAGAATGCAGGGCTTTTGAAAGAAAATCAGCTGAGTATTGAAAGGAAGTGCTCCAGCATCACAGTCAGCTCCACTTCCAGCCTCGAGGCTGA
GGTAGACTTCACAGTCATTGGAGATTACCACTCCAACGTTGGATTTGAGGACTTTTCCCGCAGCCTGCCAGAGCTGCATCGAGATCAGGGTGATGGTGCA
GGAGGTCCCATAGAAAACAATTCCACGGCGGCGTCTAATGAAATGCAGGATGAGGAGACTAAGGATCTGGAAACGGTGGAGCCCTGTTTACAGAATGTGC
AGAAGGAGGTTGTGAGCACAGTAACCACAGTAAGTGGGACAACGGACGGGCACAGCACGGAAACACAGGTCACTACAGTAAAAGCCACACAGGTTGTGGA
AGTCAAAACAGAGGCAAGAGTGGCTGAATGTGGCGATGGTGCCCAGGGATCACATACAGACGGTGCCCGCACCCACCATGCTTTACCTACAGCAATTATT
CCCCACGCGGCCACAGCAGAGACCCTTTCCTCTTCCACAACCACCCATGTGACCAAGACGGTGAAAGGTGGATTTTCTGAAACTCGAATAGAAAAACGAA
TAATAATCACGGGGGACGAAGATGTGGACCAAGAGCAGGCCCTTGCACTGGCCATAAAAGAGGCCAAACTTCAGCACCCAGACATGATGGTCACCAAGGC
TGTTGTGTATTGTGAGACAGAACCCTCCCCTGAGGAGCCTGGAGAGAGCGTTGAGAAATCTTGACGTCGGATTTTGGATGTGAAAATCTTCCCATGGCCA
CTTCTCTTTGTTATTCACCTCTGAAAATAAGGACACCCTCTCCCTCCCTTAATTTCCTCTTTACACACCATGCCAGCTGCAAAAACCACCACATCCGGCA
AGGGGCAACTAAGACCACGCTGACAGTGCCCCTTACAGAGAGAATGAGAGAGACTTGCCACCCTCCCAGGAGCAGATTCCCTAACTGAGTGCTGAGGGCA
ATAATACACCTTCCCTTCTCCCCTTCCCCTTGGCCAATCATCCTAAGAAGCATGTGTGGCACTACGGGACTGCATGCAACATCTACAGGGTTCTTTTTAT
CTGCACTACTAAGGAACTATTGCTCCGGATTGCTAGAGACCTTCAAAGAATCAATTCCTTGATGCTCTTGGCTCTTCAGCCTAGAAGGGGGTTAATCTAC
GGATTAATCAGGATACCTCTCTGCAATAGATAGAAGCCTAGCACGCTCTGAGCCTGCCCTGATAATCTTCAGCCTGGAGATCACTCTGCATTAGATAGAA
ACGCAGCACGGTCTGAGCCTGATCATTTGCATCCAGGAGAACAAATTAGCTAGAAGTCCGGCACTATCAAATCATCTTCTGATAATCTGCACTCAGTGGG
TCAAACTCTTTTTGATTGATTTTAAATGCTGCATAACTGATATTATTGATTTGGTACAGTTAAGATAAAATGAATTGCTTACTTGGTACATAGTTATTTA
GAATGAAAAAGACAAATTTCAACCCCCAGTGTGATTATTGGTCAAAGAGAATGCAAAACACTAACTGTTACCCCACCGAGGGACAAAGTATCCCTTCCTG
ACTCCTCCTAAAATGCAACAGTATATCCCTAATTTACTGCCAGCCTATGTAAGTATATATAATTTAATAATAATTAAACAACCAGACATTTTCATACATT
CTGCATCAGTTTTAGAAAAGACATTTAAATCTTGCAGATCTCATGGGTCCAAGTCTTAAATAACATCTGTCCTAATCTGAAATGACAATAATGGCTGAGA
GGAGCACTAGTTTGTTCGTCAAGGGTGTTCTTAATTTAAGAGTTGAGAAGCAAATGCAATATAAGGAAGATAAGATATTTGCAAGCACTGGAAAGGAGCA
ACTGGCATGTCAGCATAAATGAACAGTAATGCCGCCCAATCACAGCATACCATGCTCACCAGGGGGGTGAGGAGGAGTAAGATAAGAGAAGAGAAGGCAA
ATGACAATGAAAGAAGGGTGGGTCCACAACTTGGTTGTGGTTCAGGCAGAGAACTTTGGCTTTCAGGGGGATGATAGGAGTTAAAATTTAAATAAAATAT
GATGAGGAAGAATAAGAATGGTGAGATGACATAGTAATCATTTCTTCATATTGCGCCAGCAAGTTACACAGCGCTTTACATTCATTTATAACAAACAGGG
GTCTTGCAATATTTAAACAGAGTAAAAAATAGGTCCAGAGGGCTCTGATTGCTGGATAAACAAAAAGGAAAATGTAAGACGAGAAGAATAAAACAGGAAA
GCATACAGGCTAAAAGAAGGGTAAAAAGAGAAGTGGGCAGGAAAGGAGATCATTAGGTGTAGAGAGAAGAGTATAGGAGACAGAATGAGAAAGAGAAGCA
GGGGGGATGGAGTGGCAGAGAAGAAGAGAGAAAGCAAAAAGAAGCTGGGGCATAATAGGGTATATGGAACTTGAGAGGCTGGAGGGGGAACAGTAGGGGA
GAGAAAATGAGAGAGGCTGGAGGAGTAGAGGCAGTGAGGGAAGAGAAAGAAGTAGAAAAAAGGGAGTCGGTGTTTCAGTAAGTGGGCTCCTAGGATTAGC
TTTCATGGTGGGTGCTGTAAATGGATATCATTTTTTGCTGTAACTAAACAGTCAGTGCACAATATGGGAGCAGATCTGGTGAATTTTCAGAAATGTCTTG
TCTCTCAGTGACCCAGAACTGCTCCTGTGGGGGGGTCACAGCATAGAAGCTCCAGGCAAGCAACCTTGTGTTTCATGTCTGACTCCCACTGTTAGTCTGG
TTTGTGGTCTAAATCTTAGCTTGGCAGATCCCGGCAAAATCCATTGCAGCTAGGAGCACCGTAAAGTAAAAAGGAGATTGATGAATATGTTCGAGTTGTA
GTGTTCCTTAAAATCCTGAATATTCTGTGTGTCCGAGAACATATCTAACCCGCTGCTGAGGGCAGTAAGTGAATATAACTATGTACTATGTAACTATTAA
ACTGGTAACTGAGCTTCCGTACTGCAAAGGTCAGAACAAATTCTTTTTTTTTTTTTTTTCCCAACTCCTTGCAAGTAGAAAACGCTGCTGTATTAGCCTG
TTGGTTGTCAGCTTCCAAGCCTGGAGATGTCCCTGCTAGCTGGGGATTGGCTGAGCTGTGTATGTGTGAAAGGGTTAACGTCGCACAGGGGGAGGCCTGA
CCTAATGCAATGCTGTGCTCTCCCTTGACTCCCCTCCACCCTGTGCTCCGTGATGTCACTGCTCTATAGCCAATAAAAACAAACTTGGTGTGAAAAAAAA
AAAAAAAAAAAAAA
5' EST: CX836490
[+]ggattggctgcagaatagcccccttccctctgcccccaccctcccattctgcccattgcattgtgcccccctcgcccatcgctgcctgcggagggtgccc
cggaggatctctatggccggttgagggtaacccactcccccttggatcctcgctgctgacagctcctgcttgatcagactgagcagtcaccatgacgaca
gaactggggtcagagacagaactttctcctggccccgagggcccagcgcaagacggagtccctaatcctgcactaaatgcccaagatgcctcctatgcac
ccgctaacaatgtggagaggccaggagccggcgaaaacgcacgaagacccggggagggagaagagagagcggacttggcctcagagcgaacaacacccac
ccacatgcagcgatcaccccaaaaacattccaggaaacccaagagtgctctttgcagggtaacactgttggattcttccaactatgagtgtgagatagag
aagcacgctcgagggcaggtcctgttcgatactgtgtgcgggcatctcaaccttctggaaaaagattactttggcctgacgttctgcgataccgacagtc
aaaagaactggctggacccttccaaagaaataaagaagcagatcaaaagtggtgcgtggacgttcggcttcaccgtaaagttttatcctccggacccttc
ccagcttacagaggatattacaaggtattacctatgcctgcagctacgcgctgacatcatcagtgggcgccttccgtgctcctttgtcacacacgccctg
cttggctcgtacactgtccaggctgaattgggtgactacgat
3' EST: CX836489
[+]gtgacatcacggaagcacaggggtgggaggggagtcaagnggagagcacagcattgcattaggtcaggcctccccctgtgcgacgttaaccctttcacac
atacacagctcagccaatccccagctagcagggacatctccaggcttggaagctgacaaccaacaggctaatacagcagcgttttctacttgcaaggagt
tgggaaaaaaaaaaaaaaaagaatttgttctgacctttgcagtacggaagctcagttaccagtttaatagttacatagtacatagttatattcacttact
gccctcagcagcgggttagatatgttctcggacacacagaatattcaggattttaaggaacactacaactcgaacatattcatcaatctcctttttactt
tacggtgctcctagctgcaatggattttgccgggatctgccaagctaagatttagaccacaaaccagactaacagtgggagtcagacatgaaacacaagg
ttgcttgcctggagcttctatgctgtgacccccccacaggagcagttctgggtcactgagagacaagacatttctgaaaattcaccagatctgctcccat
attgtgcactgactgtttagttacagcaaaaaatgatatccatttacagcacccaccatgaaagctaatcctaggagcccacttactgaaacaccgactc
ccttttttctacttctttctcttccctcactgcctctactcctccagcctctctcat
Library:
Description: PolyA+ RNA was primed with oligo-dT primer 5'-GACTAGTTCTAGATCGCGAG CGGCCGCCCTTTTTTTTTTTTTTT-3'. cDNA was ligated to SalI adapter (5'-TCGACCCACGCGTCCG-3' and 5'-CGGACGCGTGGG-3'), digested with NotI, size fractionated in 1.1% agarose gel electrophoresis and ligated into SalI and NotI digested pCMV-SPORT6 vector. Library contains the 1.5-2 kb size fraction (additional size fractions contained in the NIH_XGC_tropBrn2 and Brn4 libraries). Library constructed at the DOE Joint Genome Institute.Anatomy: brain | Stage: frog |
Normalized: No | Subtraction: No |
Vector Details | Vector Map |
Name: pCMV-SPORT6
Type: phagemid
5' Restriction Site: SalI
3' Restriction Site: NotI |  |
Usage:
Suppliers: