XB-CLONE-3672593
Clone Name: IMAGE:7640799
|
Gene:
dscam
|
Species: Xenopus tropicalis
|
|
|
Sequence:
Full length sequence: BC168033
[+]
atggatatggctgctggttgctgggagtgctcagagtgacgcctggtctaggagagggttaatactttcctctgctctgctgagaggcagggaaggttac
cacagggatcaatgtgattaaagctgaagggaaggaaagatgtgcttgtctgcttgcctgctgcttggatctggtggctgaagcttgtgcatgtgtgtgt
gtgcgtgtgtgttttcctgcagatttttataaaggggactggatagaaccgggaatgatcttctgtttgcattcattgcatttatgggttttttcacctg
tggacttgaatctgccaaccttgtgctgtttcctttagctggaaaaacacacctggacttaagagcacccgcctacccctgtgctgcatcctccgctctg
caagggctgaattggaattaaaggagagaaaagactgatcgggtttaaggacaatcagatccattcacgcatcggcgaggcagcatcctacagagaagcc
ggactctctcctgcctgtcagcttggatctataaccttgcctgtggctagtgagcaggagagagagcgagagagatagcaggataaggagcgggtagctg
agccggtggctgggaggactgactgcagcaggggcatgtggatactggctctcttcttcttccaaagcatcttgaatgtgtccagtgaagatctacatgc
cagcctatattttgtcaatgcatctctgcaagaggtagtgtttgcaagtaccacagggacactggtgccctgtcctgcaggagggatccctcctgtgaca
ctcagatggtacctagcaacgggcgaggagatctacgatgtccctgggatccgccacgtccaccacaatggcactctccaaattttccccttccctcctt
caagctttaataacttaatccatgataatacttactattgcacagctgaaaatccttcagggaaaatcagaagtcaggatgtccacattaaggccgttct
acgggagccctacacggtccgtgtggatgatcagaaagccatgagaggcaatgcagtagttttcaagtgcattatcccctcctctgtggaggcgtacgtc
actgttgtctcatgggagaaagacacagtctcacttgtctcaggatctagatttctcattacatccacgggagccttgtatattgcagatgtacagaatg
aagatgggttaaataattatcgatgcacaacacggcacaaatacactggagaaacacgtcagagtaacagcgccagactgacagtctcagatccagctaa
ttcagccccatccattattgacggattcgagcatcacaaagccatggcaggagagagagtggagcttccatgcaaagcgtctgggcaccctataccaaag
taccgctggctaaagaacaatgtcctgctggagccggacagcagatttcagcacactgtagtcggtttattaatagagaacacaaggccgtcggattccg
gcagctacgtgtgtgaggtgtggaacaattatggcaacgccgaggtgataggatccttgtatgtgaaacaaccgctgaaggtcaacatcagcccaaggaa
agtaaagagtagcgtcgggagccagatctcgttggcttgcagtgtcaccggaacagatgaccccgatctgtcctggtacaggaacggggagataattaat
gccgggaacaatgtgaggatcaccggcgtcaaccgcgaaacactcatcatggacggaatggcaaaaagtgatagtggcgcttaccagtgctttgtgcgcc
gggaaaagatgtctgcccaggattatgttcaggtggtacttgaagatggtacgcccaaaatcatttctgccttcagcgagaaagtggtgagccccggaga
gcccgtgtcccttatgtgcaatgtcaaaggcacccctctccccaccattacctggacactggacgacgaccccatcatcaagaacggcaaccacagaata
agtcagctaatcacctccgagggcaacgtcgtcagctacctgaacatcaccaacactcaggtccgggacggcggggtgtaccggtgcacggccaacaact
ctgcgggcgtcgtcttgtaccaggctcgaataaacgtaagaggtccggcaagtatccgcccaatgaaaaacatcacggccatagctgggcgggacactta
cattcactgccgcgtcattgggtatccctactactccatcaagtggtacaaaaattccaaccttctcccgttcaatcaccggcaagtggcattcgaaaac
aacggcacgttaaagctctcggacgtacagaaagacgtggatgaaggagaatacatgtgtaacgtcctcgtccagccgcaactatcgacaagccagagcg
tccatgtaacagtcaaagtccccccatttatccagccgtttgagtcccagaggttctccattgggcagagagtgttcataccttgcgttgtggtgtcggg
agatttgcccatcaccatcacttggcagaaggacgggaggccgatcccagcgagcctcggcgtgaccatcgacaacatcgatttcaccagttctttaaga
atttccaatctctccctgatgcataatgggaactatacgtgcatcgcaaggaatgacgcagccgccgtggagcaccagagccagttaatagtgagagttc
ctcctagatttgtggttcaacccaccgatcaagatggaatctatggcaaagccgtgatcctcaactgctccgccgaaggctacccggtgccaactatcgt
gtggaagtactcaaaaggtgccggagtgccgcagttccagcctattgcgctgaatggacgaatacagcttctgaccaacggctccttactgattaagcac
gttctggaagaagatagcggatactacctctgcaaggtcagcaatgatgtgggagcagacgtcagcaagtccatgtatctcacagttaaaatcccggcaa
tgatcacatcgtatccgaacaccacgctagcaacccaagggcagaagaaggagatgagctgcacggcccatggagaaaaacccatcatagtccgctggga
aaaggaggatcgtatgattaatgttcctgaaatgtctcgatacttggtatccaccaaagaagtgggggaggaagtgatatcgactctgcagattttgcca
accgttcgggaagattccggcttcttttcttgccatgccattaattcttttggagaggacagagggataattcagctgacggtgcaagagcccccagacc
caccggaaatagagatacgagaggtgcgagctaggagcattgctttgagatggacgatgggatttgatggcaacagcccaattacaggctatgatattga
atgcaaaaataaatcagactcgtgggattctgtgcagagaaccaaagacgtatctcctcagctaaaccaggccaccatcattgacctccatccggcatcc
acatacaacatccggatgtacgccaaaaatcgtatcggcaaaagtgaggccagcaacgagctcaccatcacaactgaggaagcagctccagacggacccc
ctcaagaagttcaacttgatcctatttcatcccagagcatcagggttacctggaaggcaccaaaaaagcatctccagaacggcattatccgaggctacaa
gatcggcttccgggaatacagcacaggtggaaactaccagttcaatatcatcgacgtggacaccactggggacagcgaggtttatactctggataacctt
aaaaaatttacgcagtacggcgtagtggtgcaggcttgtaaccgggctgggactgggccgtcctctcaggaaatcatcactaccactttagaggatgtgc
ccagtcgctcccctgaaaatgtccaggcttcttccacttccccggagacaataaccatatcttggtctactccttccaaagaagccctaaatggcattct
gcagggattccgggtgatttactgggctaacctaatggatggagagctgggtgaaataaagaatgtgaccacaacgcaacccttactagagctggacaat
ctagagaaatataccaactacagcatccaggtgctggccttcacccgggcaggggacggggtgcgcagtgagcagatattcacccgcaccaaggaagatg
ttccaggccccaccgctggcgtcaaagcagctgccgcctcggcttctacggtctatgtgtcctggcttcctcctctcaagccaaacggcatcatccgcaa
gtacatggtgttctgctcacatccctacccaaccgtaatcagtgactttgaggctgcccctgattcttttttctaccgaataccaagcttgagtcggaac
aggcaatacagtgtgtgggtggtagccgtaacggcagcgggccgtggcaacagcagcgacattatcactgtggagccagtggctaaagctccggctcgga
tcttaacgttcagtggtaccgtcacaactccatggatgagagatatcgtcctgccttgcaaagctgtcggggacccctctcctactgtcaagtggatgaa
ggaaagtaacgggacacccagtctagtcatgattgatgggcgaagaagtatctacagcaacggaagtttcatcatccgcacggtcaaagccgaggattct
gggtactacagctgcattgccaccaacagctggggatctgatgagattgtgctgaatctccaagtgcaagtaccacctgaccagccgcggctcaccgtgt
ccaaaaccacctcttcctccatcaccctttcctggactcctggggacaatggtggaagctccatcagaggatatatattgcaatattcagaggataacag
tgaacaatggggcagttttcccatcagccccagcgagagatcgtaccgcctggagaatttaaaatgcggcacttggtacaagttcactctgacagcccag
aacggcgtcggcccagggcgcatcagtgagatcatagaggcaaaaacccttgggaaagagccgcagttttccaaagagcaggacttggttgccagtacca
atacgacgcgtgtgagactgaatcttattggctggaatgatgggggatgcccaattacctcatttaacctggagtacaggccttttggaaccactgtatg
gaccttagcccaaaggacgtctttatccaaatcttatattttatatgacctgcaggaggctatgtggtacgagctgcagatgagagtgtgtaacagtgcc
ggctgcgctgagaaacaagctaccttttcaacacttaactatgatggaagtacgatcccccctctagtaaagtcggttgaggcgagtgaggaaggaatga
gtaacaacaaggggataaagatgctggttactatctcctgcatcctgattggagtcctgctgctgtttgcgctactgctgattgtcaggagaaggcggcg
ggagcaaagactcaaaagactcagagatgcaaagagtttagctgaaatgctcatgagcaaaaatactcggacctcagacaccctgaataagcaacagact
ctaaggatgcacattgatatcccgcgagcccagcttctaatagaggaacgggacacgatggagaccattgatgacaggtctacggtgctactgaccgacg
ccgatttcggagagtcatcaaagcagaagtcgctaactgtgactcacacggtgcattaccagtcggtgtcgcaggctacggggcccctggtggatgtctc
agatgcccgacccggaacaaatccaactactagaaagaatgcaaaggccgggccggcagcccgcaacagatacgccagccagtggactctcaatagacct
caccccaccatatctgcgcacacactcacaacagactggaggcttccgactcccagagccgccggctccgtagacaaggaaagcgacagctacagtgtca
gcccttcacaagatacagacagagcacggagtagcatggtgtccaccgaaagtgcctcctccacctatgaagagctagccagagcatacgaacatgccaa
gatggaagagcagctgcgtcacgccaagttcaccatcacagaatgcttcatctctgacacatcctcggagcaactcacagcagggaccaatgagtacaca
gacagcctgacttctagcacaccgtcagagtctggaatctgcagatttactgcatctccaccaaaacctctagatggaggaaaggtgcaaactatggcag
ctccaaaggcgcatagaccaggtgacgtgatgaacttaccaccgtaccttagaatggactttttattaaatcgaggtgcttcaggaactagcagagacgt
gggcatggggcagccttgcttggaacctcaaaaaagtcggtccctgaagcgaccaactgttcttgaaccaatacccacggaaaacccttcgagcagagag
gtacagtcatggcagcctagcgctgcggcgccgttacctccccgggaggggacagaactaggacaggccgctaaaataagcagttcccaggaatcactgc
tggactccaggggccatttaaaaggaagcaatccctacacaaaatcctacaccttggtataacaaacaaagactgtaaatactaacaaataaacatgcaa
atcaaagctacctttttctactgaattccaacatttataatttaaagaaaaaaaaaaaaaaaaaa
5' EST: CX794189
[+]atggatatggctgctggttgctgggagtgctcagagtgacgcctggtctaggagagggttaatactttcctctgctctgctgagaggcagggaaggttac
cacagggatcaatgtgattaaagctgaagggaaggaaagatgtgcttgtctgcttgcctgctgcttggatctggtggctgaagcttgtgcatgtgtgtgt
gtgcgtgtgtgttttcctgcagatttttataaaggggactggatagaaccgggaatgatcttctgtttgcattcattgcatttatgggttttttcacctg
tggacttgaatctgccaaccttgtgctgtttcctttagctggaaaaacacacctggacttaagagcacccgcctacccctgtgctgcatcctccgctctg
caagggctgaattggaattaaaggagagaaaagactgatcgggtttaaggacaatcagatccattcacgcatcggcgaggcagcatcctacagagaagcc
ggactctctcctgcctgtcagcttggatctataaccttgcctgtggctagtgagcaggagagagagcgagagagatagcaggataaggagcgggtagctg
agccggtggctgggaggactgactgcagcaggggcatgtggatactggctctcttcttcttccaaagcatcttgaatgtgtccagtgaagatctacatgc
cagcctatattttgtcaatgcatctctgcaagaggtagtgtttgcaagtaccacagggacactggtgccctgtcctgcaggagggatccctcctgtgaca
ctcagatggtacc
3' EST: CX794188
[+]ctttaaattataaatgttggaattcagtagaaaaaggtagctttgatttgcatgtttatttgttagtatttacagtctttgtttgttataccaaggtgta
ggattttgtgtagggattgcttccttttaaatggcccctggagtccagcagtgattcctgggaactgcttattttagcggcctgtcctagttctgtcccc
tcccggggaggtaacggcgccgcagcgctaggctgccatgactgtacctctctgctcgaagggttttccgtgggtattggttcaagaacagttggtcgct
tcagggaccgacttttttgaggttccaagcaaggctgccccatgcccacgtctctgctagttcctgaagcacctcgatttaataaaaagtccattctaag
gtacggtggtaagttcatcacgtcacctggtctatgcgcctttggagctgccatagtttgcacctttcctccatctagaggttttggtggagatgcagta
aatctgcagattccagactctgacggtgtgctagaagtcaggctgtctgtgtactcattggtccctgctgtgagttgctccgaggatgtgtcagagatga
agcattctgtgatggtgaacttggcgtgacgcagctgctcttccatcttggcatgttcgtatgctctggctagctcttcataggtggaggaagcactttc
ggtggacaccatgctactccgtgctctgtctgtatcttgtgaagggctgacactgtagctgtcgcttttcctgtctac
Library:
Description: PolyA+ RNA was primed with oligo-dT primer 5'-GACTAGTTCTAGATCGCGAG CGGCCGCCCTTTTTTTTTTTTTTT-3'. cDNA was ligated to SalI adapter (5'-TCGACCCACGCGTCCG-3' and 5'-CGGACGCGTGGG-3'), digested with NotI, size fractionated in 1.1% agarose gel electrophoresis and ligated into SalI and NotI digested pCMV-SPORT6 vector. Library contains the 0.5-1.5 kb size fraction (additional size fractions contained in the NIH_XGC_tropBrn3 and Brn4 libraries). Library constructed at the DOE Joint Genome Institute.Anatomy: brain | Stage: frog |
Normalized: No | Subtraction: No |
Vector Details | Vector Map |
Name: pCMV-SPORT6
Type: phagemid
5' Restriction Site: SalI
3' Restriction Site: NotI |  |
Usage:
Suppliers: