XB-CLONE-3914941
Clone Name: IMAGE:7091115
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Gene:
atxn1
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Species: Xenopus tropicalis
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Sequence:
5' EST: CK653882
[+]
taattaatcccccccccccccccgagccaactgctccatatttggcttctattacacatttacatactggagagagagagggagagagctgtactgcaga
catcatttctactacagtagaggagacgtacaagacctgtctttctgcgagggggggcagagtaggaggaaaaaaaaagcaatagctcagacaccctctt
catccaacaagcccctatactgcactttacaatataaggtcacgaatatgctgcagtgcagttgaaatacagagaaaacactgtggcagataaggaatat
atcaaacaactgtatggtggctatggtggtagagaagcctcatgaactatctacatgcacaagttatgccaagaaataaaaccaagactgtttaatgaag
aagctggaccttcctctattagaaactcagaaacagatccatcaaacaggcattgatatatatagatctgtgtgtgtgaataaagagcacgctggaaacc
atcatacaagacacccatgaaaaagactgcagaaccctcacagtgaatgtcatttcacatcaactgttggaagattgtgctccaagggagatgattcctc
atgaagtcattgggatctctaacagatttaaatgcgactttccattcaccagactgaaatcagcgtcagtcagacagtgagcaagcagtggtggttggcg
ggggtggcagagagcaaacatngaatcta
3' EST: CN330758
[+]tttttttttttttttcgtgtttctggggcagaccacctcctcttccttgttgccagaggcttaccaggttctagtttggctgcattaaatgctgctggac
atctcagttcaccattttcagatgccatctgtgaacttccctgattaattccattctcttgttctgcatacctgtgcctgcttccagataaactgtcatt
ctttgggtgcttcagcaagaagttagccgaatccatggactggcctttctttatcgagccatttttcagatttttgagtgttagcgatatgcagacatct
cccactgacaacttggaacatggcaaatcaaacatctggcttgttctttcaggactgcaggaggaccagccttgaccaaatacgaaaaatggatactcta
tcaagacttcgacactaacctgtgaccggtgctctcccacagcaaactgcaccatagctatgcctggactatggctgctctcaattctctccactgtgct
ggagtctattttcaagtcgttgctaatatctgcactttgtatgaagtcatctgtttttaaatcctctactttctttagctcaccattggccagctgtatg
attgaccctttcataaagtaagggggcagtgtaggggcagttgccatatgagaagcaacagactgtacaacagggaggtggatttgagctgggaccaatg
cagcctggtaggcagtttgagtgccagtgtttcagcacggtagttttcactttttggaatgggcgtagtgacaaatgtatgaggcactgctgcaaactgg
gggaaatgaacgtcccattaccaggtgttacccccaaccccttaaataa
Library:
Description: 10 ug of polyA+ RNA was isolated from a mixture of embryos at stage 10, 20 and 30 and primed by oligo-dT primer: 5'-GAGAGAGAGAAGGATCC(T)16VN-3' (where V=G,A,C). 5-methyl-dCTP was used instead of dCTP in the first-strand synthesis in order to get hemimethylated cDNA. After full-length enrichment, oligo-dG tailing and normalization against itself, second-strand synthesis was carried out by priming with 5'-GAGAGAGAGACTCGAGTTAATTAAT(C)13-3'. dsDNA was digested with XhoI/BamHI and directionally cloned into the pRKW2 vector. Average insert size is 1.5 kb. Library constructed using the Carninci protocol (Genome Research 2000) by Drs. W. Wu and C. Niehrs (DKFZ, Heidelberg, Germany). Vector Details | Vector Map |
Name: pRKW2
Type: phagemid
5' Restriction Site: XhoI
3' Restriction Site: BamHI |  |
Usage:
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