XB-CLONE-3916281
Clone Name: IMAGE:7091216
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Gene:
gapdh
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Species: Xenopus tropicalis
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Sequence:
5' EST: CK653705
[+]
taattaatcccccccccccccccccaactctgcaacagggcacagaaacgagaggggttgataactaaaccaagtgacaccaaaatgactgtcaagattg
gaatcaatggatttggccgcatcgggcgcctggtgacccgcgctgctgttttaagcggcaaatgcgaagtcgttgcaatcaatgaccccttcattgactt
ggactacatggcttacatgttcaaatatgactccacccacggccgattcaagggaacagtgtgtgttgagaatggcaagctggttatcaatggcaaggca
gtcaccgtcttccaagagcgtgacccctccaacattaagtggggcgatgctggtgcagtgtatgtggtggaatctactggagtcttcacaaccaaagaga
aggccggtttgcacttgaagggaggtgccaagcgtgtcattatctctgccccctcagctgatgcccccatgtttgttgttggggtgaaccatgacaaata
tgataactctcttcacgttgtcagcaacgcatcctgcacaaccaactgcctggctcctcttgcaaaggtcatcaatgacaactttggcatcctggaggga
ctgatgactaccgtccatgccttcactggcacccagagactgtggatggccatctggcagctgtgnaagatggcaaagtgccgtcan
3' EST: CN322485
[+]tttttttttttttttgatgtttcattgttttatttagtaacacagaaacagtgacacagacaaactaccaggatgggattgtgactctgggccccttcag
tgacagagaggggttggtggggcgacaggtaagtgcttattccttagaggccatgtgacacatgagatccacaacacggtggctgtagccacactcgtta
tcataccaggaaaccagcttcacaaagttatcgttcagtgcaattccagctccagcatcaaagatggaggaatgagtgtcaccattgaagtcagtggaga
caacctggtcttctgtgtattccaggattcccttcattgggccatgtgctgcagtcttaatggcagccttgatgtcatcatacttggcaggcttggacag
acggcaggtcagatccacaacggagacatttggggtggggacacggaaagccattcctgtcagtttgccattcagctcagggatgactttcccaacagcc
tttgctgcaccagttgaggcagggatgatgttctgaccggcacctctgccatctctccacagcttgccagatgggccatccacagtcttctgggtggcag
tgaaggcatggacggtagtcatcagtccctccaggatgccaaagttgtcattgatgacctttgcaagagagccaggcagttggttgtgcangatgcgttg
ctgacaacgtgagagagtatcataattgtcatggttcacccccacacaacatgggggcatcagcttgagggggcagagaaatgaacacgctggcaccttc
cttcagtgcaaccggggcctttttcttttggtttttgaaaaactccggaaaattctccccca
Library:
Description: 10 ug of polyA+ RNA was isolated from a mixture of embryos at stage 10, 20 and 30 and primed by oligo-dT primer: 5'-GAGAGAGAGAAGGATCC(T)16VN-3' (where V=G,A,C). 5-methyl-dCTP was used instead of dCTP in the first-strand synthesis in order to get hemimethylated cDNA. After full-length enrichment, oligo-dG tailing and normalization against itself, second-strand synthesis was carried out by priming with 5'-GAGAGAGAGACTCGAGTTAATTAAT(C)13-3'. dsDNA was digested with XhoI/BamHI and directionally cloned into the pRKW2 vector. Average insert size is 1.5 kb. Library constructed using the Carninci protocol (Genome Research 2000) by Drs. W. Wu and C. Niehrs (DKFZ, Heidelberg, Germany). Vector Details | Vector Map |
Name: pRKW2
Type: phagemid
5' Restriction Site: XhoI
3' Restriction Site: BamHI |  |
Usage:
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