XB-CLONE-4351135
Clone Name: IMAGE:7026891
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Gene:
ndrg1
,
hsdl2
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Species: Xenopus tropicalis
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Sequence:
Full length sequence: BC080462
[+]
GGTGTGTGTTAAGGAGCTTGGGGATTCTTCATGTCAATGAGAATTTAAGTGTATAAAAGAACAGAAACAAAGCTGCTGGCAATTTGCACTTATTGCCAAA
ACCAGGTTTGGAACCAAGTGTGCCTTTTTTAGTCCTTCACTATGCTGCCAAATACAGGAAAGCTAGCTGGTTGCACTCTGTTTATAACTGGAGCAAGTCG
TGGTATTGGCAAAGCCATTGCATTAAAGGCTGCCAGGGATGGAGCAAACGTTGTTATAGCAGCCAAGACAGCAGAAGCTCACCCTAAGCTTCCGGGCACA
ATTTATACTGCAGCTAGTGAAATTGAAGCAGCCGGAGGAAAGGCATTACCGTGCATTGTGGATGTTAGAGATGAGAACCAAATCAGTGCAGCAGTGGAAA
AAGCTGTGGATACATTTGGAGGAATAGACATCTTGGTGAATAATGCTAGTGCTATCAGTCTGACCAACACCTTGGAAACACCCATGAAGAAAGTGGATCT
TATGATGGGGATCAACACAAGAGGCACATATCTCACATCAAAAATATGCATCCCATACTTGAAAAAAAGCAAAGTGGCCCATATCCTAAATCTTAGCCCT
CCATTAAACCTCAACCCAATCTGGTTCAAAAACCACTGCGCTTACACCATAGCAAAATATGGCATGTCTATGTGTGCGCTGGGAATGTCTGAGGAATATA
AAGGAGAAATCGCCGTCAATGCTTTGTGGCCAAAAACAGCCATACATACAGCTGCTATGGACATGCTTGGAGGATCGGGAGTGGATAAACAGTGCAGGAC
TCCAGACATTATGGCTGATGCTGCCTATGCCATTTTGTCAAAGCCAAAGGATTTCACTGGGAACTTTGTCATTGATGAGGAGCTGCTCAAGCACGAGGGA
ATCAAGGACCTTGATGTCTACGCTGTTAGTCCTGGACACCCATTGCTTCCAGATTTCTTCTTAGATGAGAGCCCAGAGGCACTAGCCAGTGCAATGGAAG
AACATGGTGCCACTGCTGCATTTAAGGCAGGAAAAGCACAGGCAAAATCGCAAGACTCTAGCCCCCTGCAAGAGACATTTAAAGCCATTGAGAGTTTAGT
CAATGAAGAGGCTGTGAAAACTACTCAAGGCATCTACCAATTTGTACTGTCTGGTGAAGAAAGCGGCAACTGGTTCCTGGACCTGAAGAATGGTAAAGGA
GGAGTGGGTAGTGGAGAACCATCAACTAAAGCTGATGTGGTGATGAGCATGGACAGTGGGGACTTCATCAAAATGTTTACAGGCAAGATGAAGCCTACCA
TGGCATTTATGAGTGGGAAGCTGAAGATAAAAGGAGACATGGGCCTGGCTTTAAAGCTGGAAAAAATTTTAGGCCAGATGAATGCAAAGTTATAACCACT
TAAGAGTTAAGCACTGGATCTATCTTGCAAATCCTAACAGCAAAAGGAAATGTACCCACCAAGCCAACAGATCAAGCGGAGTTCCCAATGACCCTTTCAT
ACATTATGAGCAACTGACAGTTTATTAGAAACCAATAAAACAACTGTGATAACATGACTGAATGTAACAAAGTGCAGACCCGTACATTGCTTTTCACTGC
AGTGATCCCTGGCACAAATGGTAGAAAATAAGAAATATTCTGTGACTTTAATACTGATGTGTGAAATAACTAATTCTTCTTTTCAAATCAAAGAAAATAA
AAACACTGCAGATCTGAAAAAAAAAAAAAAAA
5' EST: CF785084
[+]taattaatcccccccccccccggtgtgtgttaaggagcttggggattcttcatgtcaatgagaatttaagtgtataaaagaacagaaacaaagctgctgg
caatttgcacttattgccaaaaccaggtttggaaccaagtgtgccttttttagtccttcactatgctgccaaatacaggaaagctagctggttgcactct
gtttataactggagcaagtcgtggtattggcaaagccattgcattaaaggctgccagggatggagcaaacgttgttatagcagccaagacagcagaagct
caccctaagcttccgggcacaatttatactgcagctagtgaaattgaagcagccggaggaaaggcattaccgtgcattgtggatgttagagatgagaacc
aaatcagtgcagcagtggaaaaagctgtggatacatttggaggaatagacatcttggtgaataatgctagtgctatcagtctgaccaacaccttggaaac
acccatgaagaaagtggatcttatgatggggatcaacacaagaggcacatatctcacatcaaaaatatgcatcccatacttgaaaaaaagcaaagtggcc
catatcctaaatcttagccctccattaaacctcaacccaatctgggttcaaaaccactgcgcttacaccatagcaaaatatggcatgtctatgtgtgcgc
ctgggaatgtctggaggaaaataaaaggaaaaatcgccgtcaaatgctttgtgggccaaaaacagcccatacatacaagctggctatgggacatggcttt
ggaaaggaatcg
3' EST: CF785083
[+]ggaaaggggcgttcgatctccagatctctgcggctattgtatgatttcacgaagagctgaagattgttctggttaatgtcctggactatatgctgccggt
aggtctccaccagctcatggttactgtgcacttcatcctttgagaagaggtgggaaatgaccatgtcgggtaatgcgtgggtccatccagaaatcttagt
ggctgcccagtccatccagccttctgcacaggggttaatattaatcagaacgaggccttcgaccatgctggggtggttcaaagcgaatctggtaaggata
taggcaccggcccctattcccaaggcaagaacggactttattccacgttgctggatgaacgcccgggagcatttttgaccagttggtccattgatgggta
catggtctccccctcggggacagacactgcccgaccctcttgtttgaacgcccgcactcccactcgggcgcccccccccgcccaatgttggcgtgtggtg
tggagtcgcctgttgcgtcgtctggaaatttttaccttcgtctatttatgtttggggggcgcccccaatctcccccatagaaattatgttgtgtgggctc
ttaataatacacacccaattttgtttttaaaatattaaaagggagggggccccctcttggtggggggggcccccccaagaaaattttttntatatattta
ttaagaacccacccccaaaaagaagagttn
Library:
Description: 10 ug of polyA+ RNA was isolated from a mixture of embryos at stage 10, 20 and 30 and primed by oligo-dT primer: 5'-GAGAGAGAGAAGGATCC(T)16VN-3' (where V=G,A,C). 5-methyl-dCTP was used instead of dCTP in the first-strand synthesis in order to get hemimethylated cDNA. After full-length enrichment, oligo-dG tailing and normalization against itself, second-strand synthesis was carried out by priming with 5'-GAGAGAGAGACTCGAGTTAATTAAT(C)13-3'. dsDNA was digested with XhoI/BamHI and directionally cloned into the pRKW2 vector. Average insert size is 1.5 kb. Library constructed using the Carninci protocol (Genome Research 2000) by Drs. W. Wu and C. Niehrs (DKFZ, Heidelberg, Germany). Vector Details | Vector Map |
Name: pRKW2
Type: phagemid
5' Restriction Site: XhoI
3' Restriction Site: BamHI |  |
Usage:
Suppliers: