XB-CLONE-4352439
Clone Name: IMAGE:7027397
|
Gene:
actg1
|
Species: Xenopus tropicalis
|
|
|
Sequence:
5' EST: CF784248
[+]
taattaatcccccccccccccgctcattcagccggtggcagcggacttgacagctactccccgctctttgtaacaacttgccagctttgcatttctcctc
ttaaggaaacctccagcaccaagaaataaaatggatgaggaaattgcagcactcgtcgttgacaatggctctggaatgtgcaaagccggctttgctggag
atgatgctccccgtgctgtgttcccctctattgttggacgcccaagacaccagggtgtaatggttggtatgggccagaaggacagctatgtaggtgatga
agcccaaagcaagaggggcatccttacccttaagtatccaattgaacacggaattgttacaaactgggatgatatggagaagatttggcatcacaccctc
tacaatgagcttcgcgtagcccctgaagagcacccagtcctgcttacaaaagctcccctgaaccccaaagccaacggattaaagcatgacacaagattat
gttttgagacatttcaacaccccccatctatgtattgttcgccatttctagtccgtggcctgttttttcgaaatgccctcttgggtcgtaaccacctggg
ttaaccgcggaaagagaaattctgcgcaaaatgggtggttatatattcattaccacgttaactctattttttaaagaaagtgggtttatggccctatggc
ccccttttgcgataacactaggaattactgggacccttgggtcttggtaccggtgggaccccggacaaaaaacttaatccttcactgagaacaatctctt
tggaaccgcaaataaagatgctattacccgccgtttgcgagacctcttttaacggcctatttatatattcttcacgacttcctcgtgctctgttccaccc
ccccgagagagatgaaaaaacttttgggccccaccggcgattgtaccccatttttaacacctttatgcaacaatata
3' EST: CF784247
[+]tttttttttttttttcatttactgcagcgctttattttatccttacagaacggtgttttggaagttacaattctcatctggatgacatacaaattttggt
tttctacgttgtgagaacattaaggcaacatacaaaaaaatttacataaattaacttggatgcataaatttacaggtgttaactgcaacatttgtaactt
tcttcagacccattttgaatgttgggaatacaacctgggttaagaaaaagactggttcttgggcctgagtgtcaatttccaaccttactataaactggaa
agatagaagagattccttcatgaactgaccagcctccgacatgaaacaatggagtattaagcgcttaactgtgtgtggaagtctaaacctcagataccct
gtacacatctccaaaactcgacttctccataaacagcccctgtaacctagaggagaagtgtcattcgcaatactgtcgcagatcggcagcctttcacaga
aatgcttctttctacgtaaagcttagcttaagtgtcacccagactgtatgccaaccaggcaatataagagatgtgtacagggtacaatatgctagcattg
atgccaccagaatgatttgaagagacnagcacaagtcttgcattacaaaaccccccacagtgactatgtgtgtccccaaattcctaggaataagttcatt
ttggaagtttggccccttttttccagttttcaaaaaggcctaccaatgaaggcgtaacccattttgcccaagggcaaatttaaataccttttggaagaaa
actcccccccagcccaaatggcgaccgccctt
Library:
Description: 10 ug of polyA+ RNA was isolated from a mixture of embryos at stage 10, 20 and 30 and primed by oligo-dT primer: 5'-GAGAGAGAGAAGGATCC(T)16VN-3' (where V=G,A,C). 5-methyl-dCTP was used instead of dCTP in the first-strand synthesis in order to get hemimethylated cDNA. After full-length enrichment, oligo-dG tailing and normalization against itself, second-strand synthesis was carried out by priming with 5'-GAGAGAGAGACTCGAGTTAATTAAT(C)13-3'. dsDNA was digested with XhoI/BamHI and directionally cloned into the pRKW2 vector. Average insert size is 1.5 kb. Library constructed using the Carninci protocol (Genome Research 2000) by Drs. W. Wu and C. Niehrs (DKFZ, Heidelberg, Germany). Vector Details | Vector Map |
Name: pRKW2
Type: phagemid
5' Restriction Site: XhoI
3' Restriction Site: BamHI |  |
Usage:
Suppliers: