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X. laevis
10.1
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9.2
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X. tropicalis
10.0
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X. tropicalis
9.1
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X. laevis
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blastn - DNA query to DNA database
blastp - Protein query to protein database
blastx - Translated (6 frames) DNA query to protein database
tblastx - Translated (6 frames) DNA query to translated (6 frames) DNA database
tblastn - Protein query to DNA (6 frames) DNA database
Database
-- Genomes --
Xenopus laevis J-strain 10.1 Genome
Xenopus laevis J-strain 9.2 Genome
Xenopus laevis J-strain 9.1 Genome
Xenopus laevis J-strain 7.1 Genome
Xenopus laevis J-strain 6.0 Genome
Xenopus laevis outbred 1.0 Genome
Xenopus tropicalis 10.0 Genome
Xenopus tropicalis 9.1 Genome
Xenopus tropicalis 9.0 Genome
Xenopus tropicalis 8.0 Genome
Xenopus tropicalis 7.1 Genome
Xenopus tropicalis 4.1 Genome
-- mRNA --
Xenopus laevis and tropicalis mRNA
Xenopus laevis and tropicalis mRNA plus EST Clusters
Xenopus laevis and tropicalis mRNA plus CDS
Xenopus laevis mRNA plus EST Clusters
Xenopus tropicalis mRNA plus EST Clusters
Xenopus laevis and tropicalis EST
-- Protein --
Xenopus laevis and tropicalis Protein
-->
Xenopus laevis Protein
Xenopus tropicalis protein
FASTA query sequence
>XM_041573055.1 PREDICTED: Xenopus laevis ninein L homeolog (nin.L), transcript variant X1, mRNA CCCAAGGCCTTAGATCGCAGCATCCGAGTAGCAGGCGCACAGCTCCACGCTCTGCCGGCTGAGTTCAGTC AGTCATCTCCCCGTGTTTGCCTGTGGGGGGAGCGCGTGCGCCTTTTCTCCGGGTTCCATGTCTTTCTCAC GCCGACAGACGTAAGGTCTCTCCTCCTCCTTCTCCTCCTCCTGCTCTCTCCGACCATTCAAACTGCTCAG CTAGAGATCGAAGGAACAGGGTAACCGGGCTGCGGAAACCGGGGGACCAGTAGCTTATCAACTGCACCAT CTGCTTCCCATTCCCCCGGACTCCTCATCGAGTTGCACCGGACAGCTTTCCGCGCACACAGACACGTCCC CGGGATGGAGTGAGAGCGGATCTTCGGACACAGGAACAAGAGGGGAAACTGTGGTAGACTATGGGATGGA CGAAGCTGAGCAGGACCAGTATGAGGCCAGACTCAAGGAATTGTTTGACAGCTTTGACGCCACTGGTACA GGATCTCTGGATCAAGAAGAGCTGACTGATCTCTGTCATATGCTCCAGCTTGGGGAAGTGGCACCCTCCC TACAGCATGCCCTTCTGCAGGACAATCCTCTAGGCAGAGTTCATTTCGACCAATTTAAAGAAGCTCTTAT TCTTGTACTCTCCAACAGTCTGTCAAATGAAGATGCCTTCCAGGAACCAGTGTCATCTACTGAGGTCCAG CCCAAATACATTAAAGATGGAAAGCGGTATGGCAGGAGGTCTGTGCCTGAACTTCAGGATTCTCTTGAGT TTGATGAAGAGACAGTGATTGAACCTGAAGATGAAGGTACCAGGTCTTCACATGTCGGCTCCAGAAACTG TGAAGAGATGTGGAAAAGTGAAGAGGGAGACGAATATGAAGCCGAAGGCCAGTTAAGATTTTGGAACCCT GATGACCTCAGTGCTTCTCAGAATGTGTGCACTACAGATCAAGAATGGTTGGAACAGAAGTTGCAGTTGG TCTGCGACGACCTTGGCATCACGCGAAACGATCACTTAAACGGGAAAAAGCTCATCTCAATATGTGAACA GTATGGTTTGAAGAACTTGGACGAAGAGACCCTGGAAGATATGATTCAGAATCTAGATCAAGAAGAAACA ATGAGCCTCCAGGATTTTTTCTATGAAGTCTGTAAAAATAGCAAACCTTTAACACCATCATCCTCAACTC CCTACCGACACCTAAAGAGGCACCTCTCTATGCCGTCTTATGATGAGTGTGGAAGACGAACAATAACTCC ATCGTCCATGGTAGGGGCTGTTGGCTTCCGCTTACTATCTAAGCTTGATGATGGAACAGGCTACGGTTCA GTGGAAGACGTCATAGATCTTTGGCAGGAAGAAGGAATAGAAAACAGCCAAGCAATACTTAAGGCCCTGG ATTTCAATCTAGAAGGTAAAATTAACCTGGTGGATCTTACAATGATCCTGGAAAATGAGCTTTTGATGAC CAAAAATGAGGTGTATCAGGCTGCGCTGGTCAGCTTCCGTTCAGAGATCAGGCACTTATTGGAACGAGCT GATCAAGCTGCCAGAGAGAAAGAAAAGCTCCGCTCTGATCTGGAGAAAAATGAAAAATTGAAAAGCCAGA TGGCTTCAGAAGTGGATGATCATCATGCAGAAATTGAACGGCAAAATGAATACAATCTTAGGAAACTGGA TGAGGAATACAAGGAAAAAACAGCAACCTTAAAAAATGAACTGCGGAATGAGAGAGACCAAATTTTACAG CAGACCACAAAACAGCGTCTTGAACTGGAACAAGAACTTGATAAGGCAAAGGCAGAAGAGAACTATCTCA GAGACAGACTCAATTTGTGCTTAAAGGAAAACTGTCGTTTGGAGACTGAATTGTTGCAAACCTCTGAAAA GCTGGTTGAATATGAAACCCTGGCATGCAAACTGCAGAGAAGCCTGGATAATATCATGCGGGAAAAGTTT GGTGACATGGATCCCACATGTATGGAGTTCCTTAGTCAAGAGGAGAGGTTAGCACAAATGAGAAATGAGT ATGAGCTCCAACGAAGGGAGCTGCAGGACCGCATTGATGAACTTCAGCTGGAACTTGAAGACTACCGCAC ACAAGGTCTTAGAGGATCCAGGAGATCACTTAAAAATTCCTTGTTTGATGAAATGGACAATAAAAATGCT ACTGAAACTGATCAGGGTATTGGGCCAGAAGATTGTCCCCCGTTAAACATGAGCATAGAGGCAGAGATGG CCATTGAACAGATGAGAGAGCAGCATAACCGGGAAGTGGAAATTCTGACAAATGAACTTCAATGCAAAAC AACTCATTGTGAAGAACAACTGAAAGAAATGAAATCTTTATTTGAGAAAGAGAAAGCTATTCTCAAGGAG CAGTTCGAAGAAGAGATTCAAAAAGCAGAGGTGCAGTTACAATTCCTACAAATGCAGCATGCAGAACTGG AAGCTGACATTTTGAAACTGAAGGAGGAACAGTATAAGACAGAATGTGAACACCAGAGGGAGATAAGCAA CAGAGAAGCCTTGTTTCATGAGCAAAAGAGTCTCCTGGAAGAAAAGGAGGCTGCCTTACAGAAGCAGCTA ACAGAATCTAAACAGACTTTCTTAAAGGAGAAAGAAGAGTTTGCACAAAAAGCAGAGAAGGCCGAAAAGA AGACGGAGACCAAATTACTTGCACTGACAGGAAAGTTTGAAGAGGAGAAAAAACAGTTAGAGCAAAGTTT CCAGGAGCAACTTGACAGTCTAACAGTTAAACAAGAGGTTCACTTACAGAATCAGCTAACTCAAGCTAAA CAGACTTTGCTTTTAGAGAAAGAGGAGTTTGCACAGAAAGTAGAAAAGGAGGCCAATACCAAAGTAGTTG CACTAACAAGAATGTCTGAAGAGGAGAAAAAGCAGCTTGAGCAGTATTTCCAGGAGCAAATTGCAAATCT AACAGTAAAACAGGAGTCTGTCTTACAGAATCAGCTTGCTCAAGCGAAACACTCTTTGCTTTTGGAGAAA GAGGAGTTTGCCCAGAAAGTAGAAAAGGAGACTGAGGCCAGAGTGGCTGCACTAACAAAAAAGTGTGAAG AGCAGAAAATTCAGCTGGAGCAGAGTTTCCAGGAAGAAATTGCAAGTATAACAGAAAGACAGCAGTCTGA AAAAGAAGACAGGACAAAAGTTTTAGAAACCCATCATCTCGAACTCCAGAAAGAAAGGGAAAAAATGGAA ACCGAGTATAACAAAAGAATATCAGATATGGAATTTGAGTTTTCTAAGGATTTTGAAGCAGCAATGAAGA ACCACGAGGAGGCTTTAGCAAAGCTTGAAGACAAGTACCAAAATAACCTAAAAGATCTCACAGAAAAGCA TACAGAAGAAAAATCTCAGTGGGAATTTGAAAAAGAAGAGCTTATTCAAGACAATATAGAGGCACAGGAA AGACTGAAGGAGAGAATAGAAAAGGGTAAACTTGAAGCCTGTTCTGCACTTGTACAAGAGAGAGAACACA TGGAGAAGACTTATAAAGCGTATACGAATAACTTAGTTGCAGAAAAACAACAGGTACAGAAGGAGTTGGA AAATCTGTTGGCCAATTCAAAAAAGGAAGAATCTCAATTATCTGCTAAGATCAGTCAACTAGAAAGTGAT CTGCGAGAGGAGCTCACTGAGCGGGATGAACAGTTGTGCCAAGCTGAGAAAAATGCTCTACTCCTAAAGG AAACTATAGAAAAACTGGAAAGGGAGCATAATTTGGAAAAAGAGCATCTTTGTTCCAAACTGAAAAAGTC TGAGGAACAATATAAAGACCATAGTGAGAAAGCAAAACAAAAGAGAGAAGATATGTTTGTAGAAATATCT AGGCTTCAGAGCACAATCAGTGGACTGCAAAATGAGATTAGTTCTTTATCTATACTTCAAGGAAATTATA ATTTAATGAAGAAAGAGAATGCAGAGCTGAAAAATCATATAACACATCTCCAGAGCAGTGCATGCATGGA AGAGGACATGGTTGTTTTAAAAAATCTGCAGAATGTGCATGAGCAAACAGTCAAAGAAAATGTCAGGCTT GCTTCTGAGCTTTCTAGACTACGTAAGAAGCTTGACATACTTCAGTGTAAGACTGGTAAGAACAGGTTTT TGGAACCACAAAATGGACCTCAGACAGAGAAAAAACAGCTCTTAGGGGTCACAGAAAATGAGGACAGCAG CACTGTTGAAGGGGATGATAATGGTCATTATATGGAGACCCTGGAAGATGTCAACCTGAGACTTCAAAGC AAAATTAAAGAGCTTAAAAATACAACAGAGGCATTGGCTAAAATGGAAAAAAGCTATAAGAATGCTAAAG CCGAGTATGGTCACCTTCAGAATCAGATGCTTCAGCTACAAGAAAACATGCAGCAAGTGACTTTAGAAAA TGAACTTATGAAAAAAGCAGTAAGTTCAGAGGAGTTTACTGTTCCAGACCTTGAACAAACGCCTCTCACC ATTCCAGGCCTAAAACTGATCTTGGCAGTTGCCAAGAAAGAAAATTTGCAGCTTCAAGAAAAATTAAATT ACATGGAGCTTAAAAATGTGGAAGCTGTGAAAAACAACAGCGAACTTTCCTCTGAAGTACTTTGGTTGCA AAAGGAGATTCAAAATATGGAGGAAATAGCAGAAGCTTCACTGAAACTAGAAAACATGTACGAAGAGACA AAGAAAGAAAACCATAAACTAATGGTGCTCGTTGCAGATCTAGAGGAGACAGTCCGTGACATGGAAGCAA AACAGTGTATGAGACTTCAGTATGTAAACAAAGAAATTCAAACAACCGATTTTACCTCTGAAACTAATAG GGTGGAACCCCACATCAAGAATACTGATGAATGCTTTCAAAGAAATATGAAATCTCTCAAAACACAGGAT GAAAACGATACAAAATCTATAGGGAGTCCCAAAAGACCACATAATCAGGGGAATGGCGATGAGAATCTTG TAGGAAAAGGAAGAATAGAAGTCCTCAGCCCACGAAACAGGACTATGCAAAGAGAACCAAACGTTTTAGA ATCCCAACTGCTGGACAAGCACAGTGAAATGCAGAAGAGAGTTGAATTTCTGAGATCTGAGAACAAAAAA CTTAAAGAAGAAAATGTTGCATTAAAATCTGAAATAAGCACTTTAGAAGATGAAGGTGAACTGAATAATC AGAAAATAAAGGATGTCCAGGATGCATGCGAGGAAATGTGGGTGAACCTAGAGACTGTGCAGAATGAGAA GAGTGCACTTCAGAAGGTGGCAGAAAGTCTGTCTAAACAGCTGTCTGAAGTGAAAACTAGAAACCAGCAC CTTGATTCTGAAAACGCAGAACTGAGCTTAAAGAATGCAAAAAATCAAGCAGATCTTCAGGATCTAAACC GTAGGCTAGTGGCTTTCCTGAAGCAGAAGGATAAGAAAGATCTTACCAAGGGCTTGGAGGAATGGCAGAG AGACAGGAGTCTGATAAACGATGAACTGGAAAGTTACAGAGCAAAGGTTGGAGATATAGAAAAAGAACTG GCTAACCTCAAACGTCACAATCGGTTTTTAGAACAAGAGAACACACTACTGAAACAGGAAATTGAAACTA AGCAGCTCTCTAAATGCTCTGAATTCACTGACCTCAAGAATGAGATCTCTGGCTTACTAAATAAAAATGA AATGATGCTTAAAGAAAAAGAAGCGTTGGGGGAGGAGCTTAACAGATGTGCGGAAAAGTGTGCTAAAGTT ACCCATCTCGAAAGCAAGATTGCAGACTTGAAGCACGAACAGAAGTCTTGGGAACAGCAAACTCACACAC TAAAATCCCAGCTCTCACTCTCCTTGGAAAAGATCCAGAGCCTGGAGGAGAGCCTGCAAAGTGTAAATCT CCAGATATCACGGATCAAGTCAGATCTGCGTGTCGCACAACAGGAAAAAGAATCCCTAAAACAGGAAGTG ATGTCACTACACAAGCAACTGCAAACCTCCAATGCAAAGAACCAGGTCCTTGAAATGACTTTGCAGTCCT CTGGGTTACAAAGTCAACAGAAGAAAATGTACTGGGATGATCTGGAAAAATTGATGGAACAGGAACAGAA GCTTCTACGACAGGAGAACGAGAGACTCCTTAAAGAGGTTCAGAATGCAAAGTCTGACCTGGCCCAGTGC AGGGAAAAGGTACGGCAGCTGGAATCTGCTCTTATTTCTGTGAAACAGCAGAAGCACCAGAATCAGTCAA GCATGGTAAAGGTTTTAGAACAGGAAAAGTCCAGCTTAAAACGAGAATGTGATCACCTTCAGAAAGAGCT GGCCTCTGCTAATAGGAAGATTAGCCACTTGAGCTCTCTGGAACGGGATTTGGATGCCGTTAAGACAGAA AATGATGGTTCAAGAACAAAGCATGGGAAATTTGATGAGCAGTTAATGGATATGCTGCACTCAGCTCCCA GTGCGACGTTTAGCCTTTCCCAGCAGCAAAACTGTGCCACCGTCCCAAGGGAGCAGTACCTACATCTCCA GCAGGCAGATAGAAGAAGCCAGCAACTCCAGGCAGCAATGGAAATTAGGAACTCCAACACCAACTCTCCA CAGAGTGCTCAGGACCAGCTTTTGAAGAAAATGGAAGCACGCATGATGGATGTTGAAGAAAAGCTTAGGT TTGTGAAAATGCTTCTGCAAGACAAAGTGAATCAACTGAGGGACCAACACACAAAGAATACTAGAGCCGA TGAGGTCATTAAAGATTTGTATGTGGAAAATGCTCAGCTGCTGAAAGCTTTGGAGATGAGTGAGCAGAGG CATCAGACTTCTGAAAAGAAGAATTATTTGCTGGAAGAAAAGATCTCTGGGCTTAATAAAATTGTGAGAG ATTTGGCTCCGCCCCCACTTAGTACCGTGCATACTCCCCAACGGCGCTGCTAACTAAATCCACCACTGCC CTATATATTTGTAATGAAAATGGAATATTTATATGTGATATCCCTTTCAATAACAAGTGTTTTCACTGCC ATAGGAGCTGCTGAGACTTGCCACACCAATTTAAACTGCCTAAAATTGCTCAGGACCATGTAGCATACTG TATCTTTCTGGTATTCCAGTCCATTCTCTGCCTTCCTCCTGTTTTGCCACTGCCAAAGTCTTTCTTCTCA TTGCATCAGAATCTGATTTATAGTCCTTATTTACCATTAGACCATACCAATATCAATTACTGTGCCTTGA GTATCAAACATTGTTGAAACAGCCATTCAGAAATATCATGGAGTTATTTATCATGGAGTTTAGTATTTAT GTATTTAAAAATGGACAGCACTGTGTAAACACATAGCACAATATAAAGTGAGATATACATACATAGATGA TACTCTGGGGCAGATTTATGGGTTTTTTTTTTACAGAGCAGGCATTTCATAACAATTGTTATAATCCTTA AAGGGGAACCTCGCCAAAACATAACTTAAGCTTTTTGAAAGGTAAACATAATTTCAAGCAA
Load query from file:
Options
E value
0.1 (Default)
10
1
0.001
1e-5
1e-25
1e-50
1e-100
Number of alignments
25
1
5
50
100
Word size
Default
2
3
4
5
6
7
8
9
10
11
12
13
14
15
Default = 11 for blastn, 3 for all others.
Matrix
BLOSUM62 (Default)
BLOSUM45
BLOSUM80
PAM30
PAM70
Gapped alignment
True
False
Automatically set to False for sequences longer than 4500 bytes
Filtering
On
Off
BLAST time is limited to 30 seconds
