Click here to close
Hello! We notice that you are using Internet Explorer, which is not supported by Xenbase and may cause the site to display incorrectly. We suggest using a current version of
Chrome
,
FireFox
, or
Safari
.
???banner.login???
???banner.register???
Contact Us
Cite Xenbase
Search
Genes
Xenbase With Google
People
Labs
Organizations
Paper Authors
Paper Titles
Xenbase Accession
Clones
Anatomy Items
Disease Ontology
MIM Diseases
GO Terms
GEO Data Sets
Phenotypes
Genes
Xenbase With Google
People
Labs
Organizations
Paper Authors
Paper Titles
Xenbase Accession
Clones
Anatomy Items
Disease Ontology
MIM Diseases
GO Terms
GEO Data Sets
BLAST
Xenopus
mRNA
Xenopus
protein
X. laevis
10.1
(J-Strain)
X. laevis
9.2
(J-Strain)
X. tropicalis
10.0
(Nigerian)
X. tropicalis
9.1
(Nigerian)
Mitochondrial genomes
Other amphibian genomes
Genomes
Download
Xenopus
Genomes
X. laevis
v10.1
(J-Strain) on JBrowse
X. laevis
v9.2
(J-Strain) on JBrowse
X. tropicalis
v10.0
(Nigerian) on JBrowse
X. tropicalis
v9.1
(Nigerian) on JBrowse
Simple Synteny Search
JBrowse2 Tracks
JBrowse2 X. laevis v10.1 L vs S synteny
Xenbase UCSC Track Hub
Other amphibian genomes
on JBrowse
Expression
Expression Search
Anatomy Search
GEO Data @ Xenbase
RNA-Seq Visualization
miRNA Catalog
X. laevis
Protein Expression
Genes
Gene Search
Gene Search Tips
Gene Nomenclature
Gene Nomenclature FAQ
Phenotypes
Phenotype Search
Mutants
Disease Models
Disease Search
Xenopus
Phenotype Ontology (XPO)
Anatomy & Development
Anatomy Atlas
NF Development Stages (Classic)
NF Development Stages (Zahn Drawings)
Xenopus
Staging Landmarks Table
Development Stage Temperature Charts
Movies of
Xenopus
Embryos
Images of
Xenopus
Embryos
Images of adult
Xenopus
frogs
Cell Fate Maps
Xenopus
Anatomy Ontology (XAO)
Zahn Drawings
Reagents & Protocols
CRISPR & TALEN Support
???header.navigation.xenbaseSearchAntibodies???
???header.navigation.searchMorpholinos???
Guide RNAs (gRNA)
???header.navigation.searchORFeome???
Small Molecules Wiki
Protocols Wiki
Search Clones
Clone Libraries
Vectors
Obtain Frogs
Literature & Community
Search Papers
Find People
Find a Lab
Organizations
Job Postings
Xenopus
Community Groups
Meetings & Resources
Xenopus
White Paper
International
Xenopus
Board
Stock Center
Lines and Strains
Mutants
Transgenic Constructs
Clones
NXR
EXRC
NBRP
TEFOR
XLRRI
Download
Data Download
Gene Page Reports
Browse Download Site
Browse General Repository Site
BLAST Databases
???blast.header???
Download BLAST databases
???blast.blastType???
???blast.program.blastn???
???blast.program.blastp???
???blast.program.blastx???
???blast.program.tblastx???
???blast.program.tblastn???
???blast.database???
-- Genomes --
Xenopus laevis J-strain 10.1 Genome
Xenopus laevis J-strain 9.2 Genome
Xenopus laevis J-strain 9.1 Genome
Xenopus laevis J-strain 7.1 Genome
Xenopus laevis J-strain 6.0 Genome
Xenopus laevis outbred 1.0 Genome
Xenopus tropicalis 10.0 Genome
Xenopus tropicalis 9.1 Genome
Xenopus tropicalis 9.0 Genome
Xenopus tropicalis 8.0 Genome
Xenopus tropicalis 7.1 Genome
Xenopus tropicalis 4.1 Genome
-- mRNA --
Xenopus laevis and tropicalis mRNA
Xenopus laevis and tropicalis mRNA plus EST Clusters
Xenopus laevis and tropicalis mRNA plus CDS
Xenopus laevis mRNA plus EST Clusters
Xenopus tropicalis mRNA plus EST Clusters
Xenopus laevis and tropicalis EST
-- Protein --
Xenopus laevis and tropicalis Protein
-->
Xenopus laevis Protein
Xenopus tropicalis protein
???blast.query???
>XM_031906737.1 PREDICTED: Xenopus tropicalis sorbin and SH3 domain containing 1 (sorbs1), transcript variant X9, mRNA AGACTTCAGCCCTTCCACTTTCTCTGTCTCTTTATTGCATCCACCCAGGCAGCACAGCAGCAGCGCCTCT AGGAACTGGAGAACGTCTTTCCCCCCTGTCTGTATTCTAATGAGAGGGCTGAACAGCATTATCTGGGAGG TTTCCCTCTCTGGAAACTCGTCTGGTTTGTGTGTGTAGCCAGGATGGAGTAATACCTTACAAGGACTACT ACCTTTAATCCAAGTTACCAAGCTTCCCTTCTGAAACTTCAAAGAAGCCCTCAGATAGCAAACAACCAGA AGCAAAGTCAATTACTGAAGACCAATACAGCTCCCATAATGAGTTCTGAGAATGAAGTAAGCATATCAAA TAACGTCGTCAATGGAGTGACCCCAAGGTGCAACATGCCAGAAAAAGCAGATGATTCTCCCTTAAGTGTA CGTTCAGTCTCTGCTGTTAAAATCATTCCGGTGAAGACGGTGAAAAGTTTTCCCGATCTTGTTCCGACTG CAGATGTGAATCCTGGTAAGCTTTGTGCAGGGAAAGGAGCAGTCACTCTGCGGACCTCCCCAGTGCAACT GGAAAGTCAGAAAAATACTACAACACTGGACATTGAACTCTCTCCATATGATGTCCCAGCTGAAGATGTG ACAGATGATGACAGGCCTCCATCAGTAGCTGAGTCCAACGGAGATTCCCAGCACTCATCCTTAGCAGCTA AAGGCTTTCGGAGTGTGCGCCCTAATCTCACTTTTGACAACAAGTCACAGAAAACTCATCCGCCCCCAGT CCCACCTCCTCCCAAAGAGGAGAGCTTTGCATGGCGACCAAATACTAACACTAAACTCTCTTACTTAAAA CCTGTGCCTATCTTGGACTGTATTTACCTGAGTTCTCCCAAGCCCTACGTGCCATATGCTGCATCATGCA CAAACGCAGAGCTGTCTCACCCTGCCTGTACTCTAAGTGGAACCCAGGCTATTCCGGGCGATCACACTAA CACCCCAGCTTCTTCCATCCCCACTGAAGTGCAGCACACTGCTTTTAGTTCCTTGTTATCAGACACGTCA CCAAAACACTGCCCCAGTGAGGCTGGCAATGTGGATAGAAGTGTTGCTGGAATGAATTCCAGTCATGAGA CTAAAAAAGATAAAAAGGTCAGCAGTCTATATGTAGCTTGTTTATCTAACAGCACTGGCTCAGCTGCATC TGAAAATCCCACTGGCGTTGCACATGATAAAACAGAGAGTGCTGAATTGGAAGCTGATGTAACTAAATCA CCAGCCACAAACATTGTTCCTTCGATAATAGACACCGGAAAATCCCCTCCTCCTGTCCCTCCCAGGCCAT TCTTTGACCCTGTCCCAAGTAAAGATTCCGTTAGCTATGGTGACATAGACACTTTCTGGAGTCCATGTCC TCTACATCAAGATATGGGACGCACAGAGCTAGAAACACAGCATCCAGCTGGCCATGTGAAAATGACTGCA AAGGAGCCCTACTATTCATCAAAGCCACAATATCCCTTCCGGCCACAGGGATACCGCCGCATGGATGGCA CTTCAGTCACAGCTCAGCCTGAGGTTATAATAGTCCCACTCATCCAGGTTAAAGCTGAAAGAGAGCAAGA AGGCACCTCGAGCACTCCACCGCCACCTCTTGTACCTGCTGGCAAACTTTCAGCCTCCCCAGAGCCTGAC ACCTCCCAATTGGCTTTTCCTACACTTGATGATTTTATCCCCCCTCATCTGCAAAGGGGATCAAACCATA ACCCGAGCTCTCCCACTATTTCTATACAAAACAATCAGCCACCACTCTCTCCACCACCTTTACTGCATCC TCCAGTAACGGAGGATTTGCGCAGAGTCTCGGAACCTGAAATCAGTGGAGTCATCTCACCCACAGAACCT GTGACAGATGAAGCCATAACCGCAAGCATAACCAATGATAAACTTTCTTCATTTGCACCTATTACAAAAC CCTCTGTGTATCCTTCAACAACCATTGTAAACCCTACCATTGTACTCCTGCAACATAACAGAGAACAGCA AAAACGGCTTAGTAATGCACCAGACCCTGTGGTAACTAGATCTGCTGATGAGAAGCTGGAGTCATTAACT GCACAAAACAAGCAATGTCAGGATAATACTCAGAGACTGAAGCCAGCCATGGATTACACGAGAAGAGATG CCCGAAGCCCTCAGTTTCCAGAAGACTCAGTAGATGAAGTAGGCATACCCCTGCGGAACACAGAAAGGTC AAAGGATTGGTACAAGACAATGTTCAAACAGATTCACCGGCTAAATAAAGATGATGAGTCAGACTCCTAC CCATCCTATGGGCGCCATTCATATTTGGAGGATGCCAAACCACAAGCTGGGGTGCCTCGTTCCAAGAGCG AGATGGATAATATTGATATTGATCAGAACATGCGGAGATCGGTCACTCTGCCTTTGCCAGCACGCTCCTC TTCCTTGAAACCAAGCCATGAAAGGAATGACTGGGATCCCCCAGACAAAAAGGTCGACACCAGAAAATAC CGAGCCGAGCCAAGAAGCATTCATGAGTATCAGCCTGGGAAATCCTCAGCCCTTGCCAATGAGAAGATGA CTCGGGATAAAAGTCCTGAAGAGATAGATTTAAAGAATGAACCTTGGTATAAATTCTTTTCGGAGTTGGA GTTTGGGAAACCGCCTCCCAAAAAGATATGGGATTATACACCGGGGGATTGCTCAATCCTTAAAATAGAG GATAGGAAGACTGAGCTAGAGAGAGACCTCTATCAGTACGAGACTGAGTTAGATGCAGATTTAGAGAGAA TGGACAAGTGTTTTAAGGCTCCCGATAAAAGGAATGCAACTGTAAGTCGTCCAGAGGAGATTCCATCCTA CAGGGGGACAGAGGGCGCTCTGGTGGATCCCACACTCTCTGAAAATGAAAAGCAAATCTACAAGAATGTT TTAGAAGGTGGTGATATTCCATTTCATGGACTTAGTGGCCTAAACAGACGCCCCTCTAGCTCAGCATCTA ATAAAGTAGATTCAGAATCTCCAAGACACTTTGCCCCTGTTGAATATATGGATGTACCAGAAGAGCGTCT CCGCAAGAGATATGACAGCAAAGAGAAACTTATAGAGGATCAGAGAAGACTTAAGCGTGAGCAAGAAGAA GCTGATATTGCCGCCAGAAGGCACAGTGGGATTGTCCCATCACATCATCAGTTTATTACTAATGAGCGAT TTGGGGACCTCCTTAATGTAGGCGATTCATCAAAAAGGAGATCTCGGTCTGAGATGAAGCAGGCAAGAGC CAAGTATGATTTTAAAGCACAGTCTGGAAAGGAGCTACCCCTTCAGAAGGGAGACTTGGTTTTTATTTAT AGACAAGTAGATGAGAACTGGTTTGAAGGAGAGCATCATGGCAGAGTCGGGATCTTTCCAATATCATATA TTGAGGTAATCCCAGAAACAGAGAAAGCCCAGCCAAGAAAAGCCTCGCCACTACAGGTTCTGGAATATGG AGATGCTGTTGCCAAGTTTAACTTTAATGGAGATACTGCTGTGGAGATGTCATTTAAAAAGGGTGAGAGA ATTACATTGATTCGGAGAGTTGATGAAAATTGGTATGAAGGCAGGGTATCTGGAACAAGCCGTCAGGGTA TATTCCCAGTCACATACGTTGAAGTCATCAAAAGACCACGACTGAAGAATTCAGTAGATTACATGGACCT TCCAGTTTCTTATTCACCAAACAGAAGCACGAGTGCTTCCCCACAGTTTTCTGGCTATACCAGGCCACGT ACTACTACTCCACCCACTGCCATACGTAGAGCCTTCTCACCAGAGGTGCAGGCTATCACATCTGAATGGA TTTCTCTGACAATGGGCGTATCCCGCAATAACACTCCCACTGTCACCCCTCCAGTCCCGCCTTTACCTGA AGCTATGCTTTGTACCATAGACTGTATCACCCCATCTGCGGCCGCCAGTCCCACATTATCAGTTACACCA TCTGTCAGTCTCCATAATTGCAATGTCTCTGAGAATTCTACCCCAAACTCTGCCATGTCTCCATTGCCTA CATATCCATCTAGGCCTCAGTCTGCAACGCGAATAAGTTACGTTATTTCTCCCGTTAGTGAAGAAAAGTT GGCAGGATCCAGTTATGGAGGTTCCCCTGTGCAGTTTTCACAGCATGATAGCTTGATTTCAGAACTGTGC GACGTTTTACGCAACCAATACAAGTTAAGGGGTGATGCTGGCCCTGTAGTCAATGGCGAGCCGAATGATC TAAGGATCCCCAGTTATACAATGACAAAGGCCCCCATCCCACCGAGCAGAACCCATGGGGTGACCCCAGC AAGTAAAACAACTTCAGATTCATATGAGGAGAACCAGTTGTGTAAGGAGCTACTTAGCATTGTAAATAGT GACCAAGAAGAAATGAAGGGAAATGAGTGCAGTTCCCCCAAGACTGCCGACACAATATCTGTCTATCCTT ATGTGCTGTCCTCTTGTCCTGTCACATACCAACCACCTCCCAGACTTAAAGGCAGGGTCATTTTGCCACA GCCTTGCAGATCTGATGGTGAACAGACAGGAAGGGAGTCCAAAAGTCCTGTAATGATTACAGGCTCCCCG GTTAATACCCTCAACTCAGATTCTGTTGTGCGTCCTCATCACACACTGAGCACAGGACCAGAGCTCACAG AGTCTGAAAAGAGCTATGTGCAACCGCAAGCGCAACAGAGAAGGGACAGCCTAGAAAGGAGCCAGACGCC ACAGGATGCATATACCTATCAGGCTTTGTATAGCTATGCACCCCAAAATGAGGATGAGTTGGAGCTCAGA GAAGGGGACATTGTTGATGTTATGGAAAAATGTGATGATGGCTGGTTTGTAGGTACTTCTAGAAGAACCA AACTCTTTGGTACTTTTCCAGGCAATTACGTAAAACTAGTATTTTATTAAAGAAGATGGTGTTCAGAATT GCTGGGTAACATCCATCCGGAGGCTTGCTTGTGGGAATGATGCTAACCAAAAGCCTTTGCTGAATGTATT AGATAAAGTTATTTATAGAGGTATATGGTTTACACATGTCAGTTCTGGGTTTAAGAAGTGGCCCTCTGAT TCCTTTATATATGATGAAGTTAAGACATATTTCTTAAAATTTATATTGAACTTGTTGCCTTGGAAACATT TTATTTAAGTTCTAAATTTAAATATCACTTTTATTTTTATTTCAAACATTTTAATCAAAACGAGGAAAGA CATATTTTTTTATATTCATTTCAGCTGTTACATTTGTATATTTAACAGCCTAAATGAGACAGTGAGAGGC AACAGAGAATAGTTATTTTTCAGGAAAACAAGATAAGCCCCCTGAGCTAAATACATTGGTTCGTGTATGC CCTTCTACAGCCCCTCAGCTGTGTTGGGGTATAACCCTCCCCCCCCCCTTAGATTGAAGCTGTTTTATTT CAGTAGTAGCAGAAGAGTGCAGACATTGGTCAGCCAGCTCTTACCAACTGTTATAAACTAATTACTGAGC AATCAAAATTGATGTGATTTTTTTTTTACATGGCAGGAAAAATGATATGGTACAATATATGACATTGTAA TCGTCTATAGGAAATTCTGTGTACTATAGATAACATTCATGCACAAAACCATGGGGAAAAAACTATTTTC AGGCATTGTTCATAATGGTGCTCTAAATGCTCAAATGCGCCATCAGTGTTAATGGGAGTCCGTTGCCTTT ATTGCTATCTGAACAGTTATAAGGGTGAAGACACACAGAGCTACTAGAAGCAGCTACTTGTCGAGGTTAC TAAAATAGACAATGCTGATCATGTACTAATAATTGTCTCTACGTGTGTTTTAGCAGAGGCAATTCTCATT ATTGTCTATGGCAGGGTATTTTCTGGCATTTAGAAGCCATGACAAGTAGCTGTTACTAAGTAGCTCTTTA TGTCTTCACTCTAAAATAAAGATTATTATAAGGTGATTGCTATAAGAAGTAGTTGCTGTATTTGCAAATT AGAGGGGTGGTGGTACCCATTCTGTTTTGAGACAAAAGGCCATTGATTGCAAATATCTCCATAATAGTGA CAATGCATAATTCTGGTTGGCCCCGGACACTCCTTTGCTAGAAGCACTGCTTTTGTGCCTTGAGTGCACG TAGGGGCCCTTATTCTATGATTATCACTTAGTTGGTGCCTCTCTTATAATCTTTGCATATCATCTAAATT GCCTAAGGGACAGATACGGTAATATAAACTGAAATAGAAGGTTTTCCCTTTGTTGCTCTTTCCTTTAGCA TGAGAGCTCCTACAGTAAGAGCTTGTTGCTCTTTCCTTTAGCATGAGAGCTCCTACAGTAAGAGCTTGAA CTCTATGGATGTAAGTTTGTTATCAGAACACTTCACCCTCTGGATGAGGCACAAGCCCAGCATATAACCA ATAAGATCACTAGCTGGGTGTCCAGTCAGAGGAGACCACCTGAAAAAGGCCACCTTATAAAATGTAATAG ATATATATATGTGTGATAAACTGAGAAACTCAAGACATAATAGAAAAAGGCCGTGTTTCAAATCAGAAAT GATTAGAATGATCCTGTTATTGCCAAACTGGGCTCCACTTTTTTACAAAAAAGATGATGATGCAAGAAAG TATAATCTTTATAATCTGCCTATCAAAGCAATCTCCCAAACTGTAAACACCTGTAAAATAAACACATTTA TGAAAAAAAAAAAAAAAAGTGAGGGCAACATTGTAAGTTTATAGCTTATGGTCATAAAAGAAAAAAAAAA AAAAAAGATTGAGAATGTTCTTTTGTCATAACAAGATATATTTAATATAAGATGACTATTTTTTTGCTAT TGCTTTTATACAGATTTATTAACAATTGCAGCTGCGTTGGCATGACTAGCAATATGTTTTGATATATTAC CCATGTTACTGGTATTAAAGTTTTTTTTTTTCTTTTTCCATGTACACAGTACATCCACATTACAAATGGT TCATAAGAGACAAACTGTAAATATGTATATTTGACTTTGTAAAGAACATGTATGTTGTATCTTGTATAGA AAAAAAGAGTAATTTAAGTGGACTGATGGATAGAGAAAAGCATAAAATTCAGGAAAACGAAGTCTTGAAT TTAATTTAATGAACGATTTTGTTAACGACACAAGGAAAAGTTAAGCACAGAATCATTGGACACATGAGGA AATGACACTGAACACCTTTTAGCAAACATATCCATTGTTTTATTAATGTTTTTTTCTTTCAACAGAATTT TTAGCCACCATATTTAGAGTTATGTTACCATTTGGCTAATTCACAATAATGCTTTCCTTACCCAACCGTA TAATCCAATACACTTTAACAGCATTGTTCAGTTATCACCATACCAGTCACTTTTCAAGTTATGTTGTGTT GTTTTCATATTGCAGTGCATTATATTTTGAAGCCTAATAAATTAAAGCATTGAATAATT
???blast.query.upload???
???blast.options???
???blast.eval???
???blast.eval.01???
???blast.eval.10???
???blast.eval.1???
???blast.eval.001???
???blast.eval.minus5???
???blast.eval.minus25???
???blast.eval.minus50???
???blast.eval.minus100???
???blast.numalign???
???blast.numalign.25???
???blast.numalign.1???
???blast.numalign.5???
???blast.numalign.50???
???blast.numalign.100???
???blast.wordsize???
???blast.wordsize.default???
???blast.wordsize.2???
???blast.wordsize.3???
???blast.wordsize.4???
???blast.wordsize.5???
???blast.wordsize.6???
???blast.wordsize.7???
???blast.wordsize.8???
???blast.wordsize.9???
???blast.wordsize.10???
???blast.wordsize.11???
???blast.wordsize.12???
???blast.wordsize.13???
???blast.wordsize.14???
???blast.wordsize.15???
???blast.wordsize.default.message???
???blast.matrix???
???blast.matrix.blosum62???
???blast.matrix.blosum45???
???blast.matrix.blosum80???
???blast.matrix.pam30???
???blast.matrix.pam70???
???blast.gapedalgin???
???blast.true???
???blast.false???
Automatically set to False for sequences longer than 4500 bytes
???blast.filtering???
???blast.on???
???blast.off???
BLAST time is limited to 30 seconds
