Click here to close
Hello! We notice that you are using Internet Explorer, which is not supported by Xenbase and may cause the site to display incorrectly. We suggest using a current version of
Chrome
,
FireFox
, or
Safari
.
???banner.login???
???banner.register???
Contact Us
Cite Xenbase
Search
Genes
Xenbase With Google
People
Labs
Organizations
Paper Authors
Paper Titles
Xenbase Accession
Clones
Anatomy Items
Disease Ontology
MIM Diseases
GO Terms
GEO Data Sets
Phenotypes
Genes
Xenbase With Google
People
Labs
Organizations
Paper Authors
Paper Titles
Xenbase Accession
Clones
Anatomy Items
Disease Ontology
MIM Diseases
GO Terms
GEO Data Sets
BLAST
Xenopus
mRNA
Xenopus
protein
X. laevis
10.1
(J-Strain)
X. laevis
9.2
(J-Strain)
X. tropicalis
10.0
(Nigerian)
X. tropicalis
9.1
(Nigerian)
Mitochondrial genomes
Other amphibian genomes
Genomes
Download
Xenopus
Genomes
X. laevis
v10.1
(J-Strain) on JBrowse
X. laevis
v9.2
(J-Strain) on JBrowse
X. tropicalis
v10.0
(Nigerian) on JBrowse
X. tropicalis
v9.1
(Nigerian) on JBrowse
Simple Synteny Search
JBrowse2 Tracks
JBrowse2 X. laevis v10.1 L vs S synteny
Xenbase UCSC Track Hub
Other amphibian genomes
on JBrowse
Expression
Expression Search
Anatomy Search
GEO Data @ Xenbase
RNA-Seq Visualization
miRNA Catalog
X. laevis
Protein Expression
Genes
Gene Search
Gene Search Tips
Gene Nomenclature
Gene Nomenclature FAQ
Phenotypes
Phenotype Search
Mutants
Disease Models
Disease Search
Xenopus
Phenotype Ontology (XPO)
Anatomy & Development
Anatomy Atlas
NF Development Stages (Classic)
NF Development Stages (Zahn Drawings)
Xenopus
Staging Landmarks Table
Development Stage Temperature Charts
Movies of
Xenopus
Embryos
Images of
Xenopus
Embryos
Images of adult
Xenopus
frogs
Cell Fate Maps
Xenopus
Anatomy Ontology (XAO)
Zahn Drawings
Reagents & Protocols
CRISPR & TALEN Support
???header.navigation.xenbaseSearchAntibodies???
???header.navigation.searchMorpholinos???
Guide RNAs (gRNA)
???header.navigation.searchORFeome???
Small Molecules Wiki
Protocols Wiki
Search Clones
Clone Libraries
Vectors
Obtain Frogs
Literature & Community
Search Papers
Find People
Find a Lab
Organizations
Job Postings
Xenopus
Community Groups
Meetings & Resources
Xenopus
White Paper
International
Xenopus
Board
Stock Center
Lines and Strains
Mutants
Transgenic Constructs
Clones
NXR
EXRC
NBRP
TEFOR
XLRRI
Download
Data Download
Gene Page Reports
Browse Download Site
Browse General Repository Site
BLAST Databases
???blast.header???
Download BLAST databases
???blast.blastType???
???blast.program.blastn???
???blast.program.blastp???
???blast.program.blastx???
???blast.program.tblastx???
???blast.program.tblastn???
???blast.database???
-- Genomes --
Xenopus laevis J-strain 10.1 Genome
Xenopus laevis J-strain 9.2 Genome
Xenopus laevis J-strain 9.1 Genome
Xenopus laevis J-strain 7.1 Genome
Xenopus laevis J-strain 6.0 Genome
Xenopus laevis outbred 1.0 Genome
Xenopus tropicalis 10.0 Genome
Xenopus tropicalis 9.1 Genome
Xenopus tropicalis 9.0 Genome
Xenopus tropicalis 8.0 Genome
Xenopus tropicalis 7.1 Genome
Xenopus tropicalis 4.1 Genome
-- mRNA --
Xenopus laevis and tropicalis mRNA
Xenopus laevis and tropicalis mRNA plus EST Clusters
Xenopus laevis and tropicalis mRNA plus CDS
Xenopus laevis mRNA plus EST Clusters
Xenopus tropicalis mRNA plus EST Clusters
Xenopus laevis and tropicalis EST
-- Protein --
Xenopus laevis and tropicalis Protein
-->
Xenopus laevis Protein
Xenopus tropicalis protein
???blast.query???
>XM_041582595.1 PREDICTED: Xenopus laevis tensin 2 L homeolog (tns2.L), transcript variant X3, mRNA AGTACATTTTTCCCATTGATGTTGTGCTACCTCTAAATTGGCAGCTGTAATGCTTACACTACATAAGTAC AAAGTAGTACATTAATACGACTAGTAGCATAACCAGCAGAAAAAAAACATACTCGCTGTTCAGGCTTCGC TTGTTTATATCTTTTTCTTTAATCCATCTTGGGAAAGAATAAGTTAAGTATACCCAGGCTGCTCCCTGTT CTCCAAGTGCCACTGATAAGCGAGTGGCTACTGGGCAGACTCCACCCATTCTATGACTGGCCCCTGATAA GCAGGGCTTGGAGAAGGGTAGACAAACACTTGACCGGCACTTAAATTCCCAAAGCTCAAACTATAGGAAT GTTATTTCTAAATAACGGACACAGCAGTCTGATTGAGAAATTGTGTCAGGAGACTGGAAGGTTGTGGCAC TGGGTTAAATCCCGTTTAAAGAACCGAGCAAAGCAACCCAACTGTGAATGAGCAGAAAGGAACCTCAGGA AGCCAAAGCTGTTATTGACTGGCTGCAACCTTGGTTCATGTAGTGTGCAAGATAACAAGTCATAAAAAAT GTGAAGGCAAGGTGATTCCTGGCTGCTCAACCCCCCCATCAGCTGATATGAGGAGAAGGACGGCCCCAGG ACCCAGCATCCAGCACATGGGTTCCACAAAATCTGTGAACATCAAACAGAGAAGCTCTCTGCCAAGAAAT TTCAGCTTGGACCATGTAATCCAGCGCAGTTATGACCTGGACCTTACGTACATCACAGAACGCATTATCA GTGTCTTTTTTCCAACCAATCTAGAGGAACAGCGCTACCGGGCCAACCTGCGAGAAGTAGCAACCATGCT GAAATCCAAACATGAGGATAAATACCTGCTTTTTAACCTATCCAGGAAGAGACATGATATTGCCAAACTC AATCCTAAGATACAAGACTTTTTTTGGCCAGACGGCCATGCGCCCCCACTGGATGTTATCTGCTCCATCT GTAAATCCATGGAGGCCTGGCTGGCACAAGACCCTCAACATGTGGTGGTCCTGCATTGCAAGGGAAATCA GGGGAAAACGGGAGTTGTCATTGCATCCTACATGCACTATAGCAAAGTATCCGCAAGTGCGGATCAGGCT CTCAGCACTCTGGCCATGAGAAAGTTCTGTGAAGATAAGGTCTCCGTGTCTCTGCATCCATCTCAGCGCA GGTATATCAATTATTTTGGAGGCCTGCTGTCTGGTACCATTAAAATCAGCAGTGATATGCTCTCTCTTCA ATGTGTGATGCTGCCCTTCATTCCTGCCCTGCAGACAGCAGGCGGATTCTGTCCTTTTGTAAAGATATAC CAGTCCATGCAGTTGGTCTACACATCTGGAATCTATTCAAGTCATGGAGGAACGACACCTCAGAAGCGTC AGCTGTGCATCAGCTTGGAACCAGCGCTACTGCTGAAAGGGGACATCATGGTAAAATGCTACCACAAGCG CTGCAAGCCTCACGAGAGGGAAGTGCTTTTCAGGGTGCAGTTTCACACGTGCACCATCCATAAAACCCAC CTGTGCTTCAGTAAAGACCAGCTGGACTGCGCCTTCACAGATGACAGATTCCCAGACGATGCTTCAGTGG AATTCATGTTTTCTGCTGGACAAGACAAAGCTAAAGATCGTGAAGTGTTCAGCAAAGACCCCAACGTTTC AGTGGATTATGATATCACTGATCCACTGGTGCGATTTGACTCCTATGAAAACCTCAATATGATCCATGAG GACAGCCTGGAGGGGGATTTGAGCCACACTCGGGGACCATTGGATGGCAGCCTTTATGCACGTGTGAAGA AGAAGGTTACCCCAGTAACATCTAGTAATGGAAGTCCAGAGCAGCACAGACGTCTTTTGTCTGTCAGCAG TGACTCTGGCCATTCTTCAGCCCCCACAGAGAGGTTGGAGGAAACTCCTCAAAAGTCTTTGCCCACAGCA ACTGAAAGACAAGATCTGGAAAGACTTTTGGGTGGCTTTGGCGTCAGTGTGAAGCAAGAGGCGGAGCCCC ATTACTCTCAAGTCCTTAAGCATGAAGAAGTCGCAACACAAAATTTAAATCAAAGGCAACAGATGGAGGA AAGAGGCCTGGATCAGGAAGATGCAAACCAAAACATTCAGACAAAGATAAATGGAGAAGTGAGGTCTCCA TATTCTCCCGTGTGGCCAGTAACTCCTGATGGAGGAGCAGCCCAGTGCTTGCCTTTGGCTTCATCATGCT GGGAAGGTCAGAGAGAGGCGGCTTGTGAGACACATTGGAATGGTCAGAGAGAGGCAGCCATTCTAGAAGA AGAAATGGGACAATATGGGGAACTGGCTATGTACCCAGGCAGAAGGCATTTGATCTCAAGACAATGCTCC TGTAGGCTGGGCTACTCCGGTCCAAATATTGAGGGGCCACCAAACAGAAATTACTTCAGGCAAGAAGGCA TTATTGACACTCGAGGTGGGACAGGGGCTGGTGTTATTCTACAAAATGCTCATTATCCAGGGATGTATGG AGAACAAGAAAGGAGAAGACTGTTTCGCTCATTATCTGAGGGACCTCAGCATTACCCAGCTCATGCACAA AGTCCACCAAAGAGAGGTAGTTTGAGGGATACACGCCCATACATTTGCCAACCTTCTCCACATGAACCCC CTTTCCCACCAGCATGTCCTTGTGCTCATTGTCAGAACTCTGCCTGCTACCCGGTGACTAACATGCAGCC ATTTCATCGTGGGGAGCTGCCGTTGCATATTCCTCAGCCTTATGGACAGAGTGTTCAAATCAACCACGAT TTTCCACATCCTTTCCAATTCCCTCAAACGAAGATGCTTTATGGCTATCCACCTGCCCACGGAGAAGAAC CACTGCATTTTAACCATTTCACAGAAGGTGGCTATGGCCATACATATCCACATTTTCTAAATCCGTCTTA CCTCCCTCCTCACTGCCCACCTAATGGCTATGGTCCCCACACATTTCCTAATTCCATTTCCCCATATAGC CCACCTAGAGGTCAGTCTCCTCCTTCTGGCTCTGTATCTCCAGCCAATGTCTCTGATCCCAGAAGAATGA GTGGTGACACCATCTCTGCAAGCAGTGTCAGTGAACTCACATCTGTGGAACAACAGCAACAGGAAGAGCC CAGTGATCGTGTCATGCAGTTAAATGCTCCAACACTGCAGCTGCATCAGCACATGGAGACGGGACCGGCT GTCAGCTCCTCGGCTATTCTACATAGTAACTCTTCTGCCCAAGGGAGCCCTCAGCAGTCAAGCTCTCCCA TGGATGCTCACATAGCAAGAAGCACTGCTGGCTCTGATATTAACATGCATGTCCATAGCTTAGTGCAGGC AGAACATTTTGTGCATCCACATAGTCCTGTGCACACAAGCACTCCCATAAATACTCACTGCCAGTCTATT CAGACAAATAACCTTCTAAATGTGCAGAATCCCACCCTTCAGAGCCATAGTGTGACACAAAAAAGCCCAA CATCCCCCACACTCAATCCACTTGTGCACATGCAGAATCCAACTCTTCCTGGCTATAATCAGGGGCAAAC AAGTCCCACATCACTCAGAACAGCTCCTCCTGTACACATGCACAATCCATCTCTGCAAAGCCATAGTCAG GGGCAAACATGTCCTACAATGCACATATCAGCTCCTCCTGTACACATGCAGACTCCCGCTCTTCAAAGCC ATAGTCAGGGGAAACTGTATTCTACTTCCCCCACACACGCCCCATCAGTACATGTACAGAATCCAGCGCT GCAGAGTCACAGTCAGGGTCAAACCTGTCCTACATCCACCCCACACAATCCAGCTGTGCACACGCAGAAC CCAGCTTTTCAAAGTCAATGTTTGGGCCAAACATGTCCTGCATCTCCAGCACATAGTCCATCTTCCCAGT TAGGCCATACCACTCAGCTACCCAGTCCATCTGTACAACTGAATGGAAGTAGCCAACATATGAGTTTGGC TGTACAAGGGCATGGCAAGCTGCACTCTCCTGATAAACATGGACAAGTGCAAGACAATGTGCCCACTAAT GGCCTGACAGCAAACAGTCCACTCAACACAAAGAGTTCTCCTGAGCGACCAGACATCCCCAACCATACAC AAAACACATGTACACAAGCACACAACCCTCCTTTACCTTCTGAGCCACATGTACAGACAGGCAACTGTGT AGTCAAACAGATCTCCAGTACATATCCACATTCTCCTAATCACAGGCAGTCTTCAGAGGGCCAGGCACCT GTCCCCCCAGCAATTGCACCTACACAAACAAATGTGCCTCAACAAAAACTGGTCCAGTCTCACAGCTCTG TAAGCACAAACAGTTCATCAGTAAAGCCATATGATACAGTCTATACACAGAGTCAGCTTGTGCAGACAGA CACTTCTGTAGGGACACAGATCCCTCCTATACAGTCGCACCATCCTGTGCCCAAACCAAGCCAAGTCCAC ACACAGAGTCCTTCAGTGCAACTGTACAGAACCATTGGGGGTCAGTGTTCATCAGTGCAGACCCAGAAAA CTGCACCTACGCATGCAAACATTAACAGTGCTGCAGTAACTGACAGGCCTGGATTAGCAGCATCTCATGT GAATACGGCCAATGAAGCAAATACATTGTTGCCAAGTTCTTTCTCTCAGACACATGTAACTAAAGTACCT GTAACATTGGAGGCTAAGAGAAGTCACTCCACGTATGGGCCTATTATATCATCTGCCAGTGGAACGATTG CTTTTGGGTCTAGTTACAGTCCTCAGAGTTTTTCTGTCCCAAAGATCACTGTACCGCTCCAAAAGAGAAG TGTCACTATATCCTTGCCCGTGAGCCCTGTAAACCCACAAGGAAAGGAAGCACCAACCAGCCCACCAAAA TCACCAATGGGAAGTCAGAGTGATCTCCTGCCTCCTTCTCCTACACCTTCATTCCCTATAAGAACTGCCT TTTATTCCAGCAGCCCTTGCCCGCCTAATATACAGCCACCACAACTGCCAGAAAAATGTCACTCTCCAGC AGAAGGGGAAAAAGCTCAAGTGAAACCCAATGGACTGTCTGAGTGCAACAAAGGCCATTCATCACCCGTG GATACCCAACAAGATGCTCCAGTTACAGGAAATTTTGTGCAAGACTTTTCCAAGTTTTGGTATAAGCCGA CCATTTCCAGGGAGCAAGCTATTGCCATATTAAGAGGTGCAGAGCCAGGCTCCTTCCTGATTCGGGACAG TAACTCATTCCGTGGGGCATATGGTTTGGCACTGAAGGTCTCCAGCCCTCCTCCAAACGTAGCAGTGCAG CTCTACAAAGGAGATTCCGCCGAGCAGCTGGTTCGCCATTTCCTCATTGAGACTGGACCAAAAGGAGTGA AGATTAAAGGCTCACCAATTGAACCCCATTTTGGCAGCCTCTCAGCCCTGGTGTCTCAGCACTCGGTCAC CCCGCTCTCTTTGCCATGCAGACTTCACATCCCTTCCTGTGATCTGGTGGAGCAGAGCTCAGAGGTCATG GTGCCTACAAACATGAGCACAGCAGCAGATTTATTGAGACAAGGAGCAGCATGCAGTGTTCTCTTCCTTG GCTCTGTGGACACAGAATCTCTAACCGGGCCCCAGGCCATTTCCAGGGCATCAAATGCCATCCTGACTCC CCCAAGGTCCAGTGCAACTACTGTCCATTTCAAAGTATCTGACCAGGGTATCACCCTTACGGACAGCCAG CGGAAACTGTTCTTCCGGCGTCATTATCCTGTTTCTAGTGTAACGTACTGCAGTAGCGACCCACAGGATC GCAGGTGGACCAATCCAGACAGGACAACATCAAAGGTGTTTGGGTTTGTGGCTCGGAAAGCAGGCACCGC GGCCGAAAACGTGTGTCACCTTTTTGCGGAACTGGACCCTGAGCAACCGGCGTCGGCCATTGTTAATTTT ATCACCAAAGTCATGCTGGGTGCACACAAGAGATAAACGATAGTGTCCGTTAGGGGGGAGGAGACTAAAG GTCAGAGAATGTCATACGATGGGACCCAGAAGACGTGAGAGCGAGTGCTTGCAGCAAGTGTGGATACTGT TACTCCCGTAACCCAATTCTGCTGGAGCTTCCCAACAAGGAAATGGAATGTTGGGGGAATGTATACTCCC CGATCTATGGAGAAAAGCAGAGCAAGCATTGACCTTGTGATACTGTATTGAACATTACTGTAGAAAATGT AAGTGCAGCTGGCAGCTCCCCCGGGGGGTCTGTAAAAGCTCAGTAGAAAGGCATCAGACAAAATGATAAT CATGTATCCTGGTTTCAGGAATGTCTATCACCGTTGCTTATCAGCCTGGGTCGGGGCCCTTATTGTCAAG CACAATATTACTAAGACACAGACACCCCAAAATTCCCAGCTTGTGCCTTCAGGGGATAAGTAGTGTAACA TGCGCTACACTAACAAGCAGCCATGTTTACACTCCCTTTTGTATATAAAATCCATGTAAATTGCAATATG GGAATGCCTTCTCCTGCTCATCATCTCTAGGGAACGTTTTATGATATCTGCTATGCCCTGGGCTTGCCCA CAGCATGCTGCTTATTAATCACCATAACTATGTAAGGGCGCAATAACTGCTACGCAGTATCTGTTCAATT CGTAGTGTTTCTTGTTCTAAGCCACAATAGTGAAAGTTCCCACTTTCTCATCTTCCTCACCATTAGCAGT AGATATTCGATAGCCTATAAAACAGCAATAATGTAAATAATGTGGAGCTGGAACGTTGCCAGTGTATTCT AAGAGGATGACGCTTTTTGTGCATCCATATTATGTTTCGTTTAACTGCCAGCGCTCTCGGAAAGCTGCGG CTTCTTTCGGAATTCATTCTGCCGACTTGTTAAATTCCTGTTAGGTTGACTCGACAGACGGGGGCCCATT GCAAGGCTTGATCTTTTGCTCAGGTGCACTTGGTCTTATGGAATTGTTGAACATTGGAAATGTAAATCCA ATAATAAAAAAGAAAGTTGGTTGCCCTGGGCGGTCTTGGAAGCTGATATTAGCATGTGGCCAGCACCTGC TGTTAGACTGTCTGGCTTTGCCACTGTATTGTTAGCATATGTTCCATGTACCTTCTGGAAAATAGACACA GATTTATTAAGGGTCGAATCTTTTTATGGTCTGAACAGTCAGATTCAAATAATCCAGACTCGAATTTTTA AAAACAAGGAATTCGATTTTTGAGATTGATCAGACTCTGCCCCTTTAAGAATTCAAATTTGACTATTCGC CGCCTAAAACCTGCCGAATTCATGAGTCAATGAAAGACGTCCAGGGACCAATTTGGACATCTTAGTAGCT TTCCTGGCATGCAAGTGTTTTTTCGGAGAAAAAGCTAGAATCAAGTTTGGTCAAAGTCGATTTGCGTTTC CAAGCTGGCAAAATTGAGATATTCGATTTTTTTTATAAATAACCCCCCCCCCCAGTCGAATTTCAAGTAT ATTTGAATTTAATAGTTTTTTAAAAAAAAAACCTCAAGAATATAAAATTCGACCGTTAATAAATGTGCCT CTAGGTGTGTTAAATGGCTAGAGCTATGAATAGATGCTCTGGGTCCAATAACTTAAGACTTTTCCTTTCC GAAAACTGCCAGTTAATGTGAAATTTCCAGGGGTCACCGTGTAGAACGGACACAGTAACACCCAGCAATC TCATGCATTCAGCTAATTCTGCACTGGAAATGTACTTGCCTGCTTCTCACAATCACAGATACTAGCAGCT TGTCAACTATCACAAAGCGACAGAGAGGCTCAAACTAAATAAACCTAAACTCCGACTGATGCAATAAATA GCTAATAAAACTGAACACTAGTGCTTACAAATATTAAATGTTAACAAGTTTAAGGTTGCACTTTTAGCAT CAAGTTCTGGAAGTCCAAGTAGACGGGTTCCACTTTGTTGTCCTCCCAACCATCTTTGTCAGGCTTCCAA AGCAGTGATGCTGGGAGTTGTCTTTGTACATGTATGGTACCTGTTATGCAGAATGCTCGGGACCTGGGGT TTTGCAGATAATGTTTCTTTCTGTAATTTGGATCTTCATACCTTAAGTCTGCTAGAAAAACATGAAATAA AGCCAATAGGCTGGTTTTGCTTCCAATAAGGATTAAATTATATCTAAAACGAGAGGTGTGAAGAACTTCA GTCAGACGCAGTGGTTTGCTGCAAAGTGGTTGCGTTTTATTTGTTTCGAGACTCAAAAACATGTAGTGTT AAATAAAACACAACCAATTTTGCAGCAAACCACTGCGTCTGACTGAAGTTCATCACACCTCTCGTTTTTG CATTATCGGCTTCATTGGACGGAAGCATCAGGATTGAACTTGTTGAATCATTCACCTTTATCTAATTATA TCTAATTTGGGATCAAGTACGAGTTACTGTTTTATTAATACACAGAAAAAGGAAATAATTTATATAAAAA AAAATGGATTATTTAGATAAAGTGGAGTCTATAGGAGACGGCCTTTCCGTAATTCGGAACATTCTGGATA ATGGGTTTCCGGATAATGGATCTCATACCAGTACAAGATCTAGCAGTTGCTCAGCCCTGCTCCTCAGTTC TGCATGAGGGCTTACACTCTACAGAACATATAAAACCATATAAAGTATGTCCTGTCCAACTGCTGTTCCC CTCCCCCGTACCTAAACTACTTCCTGTATTGCAACCCCAATAGCATCGGCTGTCAGCAACCAAAAAAAAA AACCAAAAGCACGAAGGTGTGTAA
???blast.query.upload???
???blast.options???
???blast.eval???
???blast.eval.01???
???blast.eval.10???
???blast.eval.1???
???blast.eval.001???
???blast.eval.minus5???
???blast.eval.minus25???
???blast.eval.minus50???
???blast.eval.minus100???
???blast.numalign???
???blast.numalign.25???
???blast.numalign.1???
???blast.numalign.5???
???blast.numalign.50???
???blast.numalign.100???
???blast.wordsize???
???blast.wordsize.default???
???blast.wordsize.2???
???blast.wordsize.3???
???blast.wordsize.4???
???blast.wordsize.5???
???blast.wordsize.6???
???blast.wordsize.7???
???blast.wordsize.8???
???blast.wordsize.9???
???blast.wordsize.10???
???blast.wordsize.11???
???blast.wordsize.12???
???blast.wordsize.13???
???blast.wordsize.14???
???blast.wordsize.15???
???blast.wordsize.default.message???
???blast.matrix???
???blast.matrix.blosum62???
???blast.matrix.blosum45???
???blast.matrix.blosum80???
???blast.matrix.pam30???
???blast.matrix.pam70???
???blast.gapedalgin???
???blast.true???
???blast.false???
Automatically set to False for sequences longer than 4500 bytes
???blast.filtering???
???blast.on???
???blast.off???
BLAST time is limited to 30 seconds
