Click here to close
Hello! We notice that you are using Internet Explorer, which is not supported by Xenbase and may cause the site to display incorrectly. We suggest using a current version of
Chrome
,
FireFox
, or
Safari
.
???banner.login???
???banner.register???
Contact Us
Cite Xenbase
Search
Genes
Xenbase With Google
People
Labs
Organizations
Paper Authors
Paper Titles
Xenbase Accession
Clones
Anatomy Items
Disease Ontology
MIM Diseases
GO Terms
GEO Data Sets
Phenotypes
Genes
Xenbase With Google
People
Labs
Organizations
Paper Authors
Paper Titles
Xenbase Accession
Clones
Anatomy Items
Disease Ontology
MIM Diseases
GO Terms
GEO Data Sets
BLAST
Xenopus
mRNA
Xenopus
protein
X. laevis
10.1
(J-Strain)
X. laevis
9.2
(J-Strain)
X. tropicalis
10.0
(Nigerian)
X. tropicalis
9.1
(Nigerian)
Mitochondrial genomes
Other amphibian genomes
Genomes
Download
Xenopus
Genomes
X. laevis
v10.1
(J-Strain) on JBrowse
X. laevis
v9.2
(J-Strain) on JBrowse
X. tropicalis
v10.0
(Nigerian) on JBrowse
X. tropicalis
v9.1
(Nigerian) on JBrowse
Simple Synteny Search
JBrowse2 Tracks
JBrowse2 X. laevis v10.1 L vs S synteny
Xenbase UCSC Track Hub
Other amphibian genomes
on JBrowse
Expression
Expression Search
Anatomy Search
GEO Data @ Xenbase
RNA-Seq Visualization
miRNA Catalog
X. laevis
Protein Expression
Genes
Gene Search
Gene Search Tips
Gene Nomenclature
Gene Nomenclature FAQ
Phenotypes
Phenotype Search
Mutants
Disease Models
Disease Search
Xenopus
Phenotype Ontology (XPO)
Anatomy & Development
Anatomy Atlas
NF Development Stages (Classic)
NF Development Stages (Zahn Drawings)
Xenopus
Staging Landmarks Table
Development Stage Temperature Charts
Movies of
Xenopus
Embryos
Images of
Xenopus
Embryos
Images of adult
Xenopus
frogs
Cell Fate Maps
Xenopus
Anatomy Ontology (XAO)
Zahn Drawings
Reagents & Protocols
CRISPR & TALEN Support
???header.navigation.xenbaseSearchAntibodies???
???header.navigation.searchMorpholinos???
Guide RNAs (gRNA)
???header.navigation.searchORFeome???
Small Molecules Wiki
Protocols Wiki
Search Clones
Clone Libraries
Vectors
Obtain Frogs
Literature & Community
Search Papers
Find People
Find a Lab
Organizations
Job Postings
Xenopus
Community Groups
Meetings & Resources
Xenopus
White Paper
International
Xenopus
Board
Stock Center
Lines and Strains
Mutants
Transgenic Constructs
Clones
NXR
EXRC
NBRP
TEFOR
XLRRI
Download
Data Download
Gene Page Reports
Browse Download Site
Browse General Repository Site
BLAST Databases
???blast.header???
Download BLAST databases
???blast.blastType???
???blast.program.blastn???
???blast.program.blastp???
???blast.program.blastx???
???blast.program.tblastx???
???blast.program.tblastn???
???blast.database???
-- Genomes --
Xenopus laevis J-strain 10.1 Genome
Xenopus laevis J-strain 9.2 Genome
Xenopus laevis J-strain 9.1 Genome
Xenopus laevis J-strain 7.1 Genome
Xenopus laevis J-strain 6.0 Genome
Xenopus laevis outbred 1.0 Genome
Xenopus tropicalis 10.0 Genome
Xenopus tropicalis 9.1 Genome
Xenopus tropicalis 9.0 Genome
Xenopus tropicalis 8.0 Genome
Xenopus tropicalis 7.1 Genome
Xenopus tropicalis 4.1 Genome
-- mRNA --
Xenopus laevis and tropicalis mRNA
Xenopus laevis and tropicalis mRNA plus EST Clusters
Xenopus laevis and tropicalis mRNA plus CDS
Xenopus laevis mRNA plus EST Clusters
Xenopus tropicalis mRNA plus EST Clusters
Xenopus laevis and tropicalis EST
-- Protein --
Xenopus laevis and tropicalis Protein
-->
Xenopus laevis Protein
Xenopus tropicalis protein
???blast.query???
>XM_041563560.1 PREDICTED: Xenopus laevis NBAS subunit of NRZ tethering complex L homeolog (nbas.L), transcript variant X2, mRNA TTCTGCGCACCGCGAAGCGTCTTGTATTTTCCTTGGCAGCCGCCGTCCACGTCACATTCCTTGCCAGGAG TAAAGATGGCGGCGCCTAGTGATCTGACGGACAGCGGGAACCCAGAAGAAAATATCTTGTATGATCTGCT AATAAACACCGAGTGGCCTCCCGAGCCCGACACACAGCCTCGAGGCAGCCGTGAGCATGGAGCATCATTT GTCCTCACAAAAGCAATTACAGGTCCTGCACTTTATGTGCTACAGTATGTTTGGTACAGCCCTGCCAAAT TCTCCCTTCCTTCTGGACTTGCTTGCTTGGTTAACAAACAGATTGGCTGGCATCTGGTTCTTACAAGCAA TGGGAAGCTTTTGGCAGCTGTTCAGGACCAGTGTGTGGAAATCAGGTCTGCAAAGGACGACTTTGGCTCG GTGATTGGAAAATGTCAAGTTCCCAAAGACCCCAATCCTCAGTGGAGACGGGTGGAGTGGAGCAACGACT GCACTTTGGTGGCTTATGCTGAAAGCACCGGCACCGTCAGATTATTTGATCTCATGGGCAGCGAACTCTT TGTCATCCCACCGCAAACGAGCTTCCCTGGAGATCTCAGTTATGCAATCGCCGGACTCATCTTTCTTGAG TACAAAGCAAGCACGCAGTGGTCAGCTGAACTTCTGGTAATTAATTACCGTGGCCAATTAAAAAGTTACC TAGTGAGTGTTGGAGCCAATCAGAGTTACCAAGAGAGTCACAGCTTTAACTTCGCCTGCCATTACTCCCA TGGAATCTCATCAGTAGTTTACAGTGCAGCACACAGGCTTCTCCTCGTTGGAGGCATTGGGACAAATGAA GACGGGGTGTCTAAGGCAACACAATGCGGAATAACAGCCTGGAGAGTTCTGTCTGGCTCGCCTCATTACA AACAGGTCACTAATTACGAAGATGATGTCGGCACTGCGCAGAAGAGAAAAGGATTATGGAGAATTATGAA TTTCAGATTATCTCACAGACATGGAACAGAACAGGATGGAATTTTTAAGATGAGCCTTTCTCCTGATGGC AAGCTTTTGTCTGCCATTCATTTCTCGGGCAAACTCACCATCTGGAACATACCATCACTGAAGCTGCAAG GAGACTGGGCACAGAATGAACAGCCTGGCTATGATGAGATCAACCCTGATTGGAGGACTTCAGTGGAAAA GAGAAAAAAGATGAAAGATAAAGAATCCTATTATTCACTGACAGACATAAATTGGTGGGCGGATAATGCT GTGATTTTGGCTCGTTGCTCCGGTTCTTTGACAGTGTCTTCTGTGAAAACATTAAAGAACCTGCTGGGAA AATCCTGCGAATGGTTTGAGACTGCTCCACAGGTTACTGCAGCTCACGATGGAGGTTTCCTCAGCTTGGA GTGTGAGGTAAAGCTGGCACCAAAAAGGAATCGACTAGAAAACAGATCTGGCGAAGATGAGGATGGGGAT GACGACTCTGATTGCGATGAAGAGAAGTCCGCCAAAGCCCGATACTTTGCATACATAAAACAAGGACTTT ACTTTGTGACCGAAATGGAAAGGTTTGCACCTCAGCGTAAACGTCCTCGCACAATAACCAAAAACTACCG ACTTGTGAGTTTAAGGTCTACAACCCCAGAAGAGCTCTATCAGCGAAAGATTGATAATGAAGAATATGGT GAGGCTTTGTCATTAGCTCAATCATATGGTCTTGACACTGACCTTGTCTATCAACGGCAGTGGAGGAAGT CAGCCGTTAACATTGCCACCATCCAAGATTATCTGAGCAAAATTAAGAAGAGATCCTGGGTACTGCATGA ATGTTTAGAAAGGGTTCCAGAAAATGTAGACGCTGCAAAGGAATTGCTAATGTTTGGCTTAAAGGGCACT GACCTGGAGGCTCTGACAGCCATTGGCAATGGAGAAGATGGCGGAAGATTCATCTTGCCTGGAGACGTTG ACCTGGACGATGTCCCCTATGAAGAATTTTTGTCACCAGATGAAGAAGCAGAAAGCAGGAGAGAAAAGGA GAAGGAAAAGAGAGAGCAGCTGCTTCAGCTGGTGAATTTTAAGAATTTAACCCTGGAGCAAAAGGAATTA TGCCGCTGCAGACTCAAGTTGTTAACCTATTTGGATCGTCTGTCAACCTACGAGGAAATCCTGGGGGGAG CGCATGCAGCTGAAGAGAGATACGACGCCGAGTTCTTCAAGAAGTTTAGGAGCCAAAATATCGTGCTGTC AGCAAGAACATATGCTCGGGAAAGTAATGTGCAAGCCTTGGAAATTCTGTTTACTTACCATGGGTCTGAC CTGCTACCTCATACCTTGGCCATTCTATCCAATTTTCCTGAGACTACCTCACCCCATGAATATGACACCC TGCTTCCTGCTTGCTTTGATGAAGGGGAGCTGAAGATTGTCCCCTGGAACGAGCGAGAGCATCGCGAAAA AGACTGGTGTGAGGCACCTGAGTGCAAGACGATGATCGAGCCTTGCCCAGCAGACCCAGCCGTATTTCTC TACGAGGAACAGCCTGAGCTGCTTGCCTACAAAACCCATCAGCTGCCCATTGATATTGTGAAAAACTGGT ACTGGAACAGAGCTCAGGAAGTGGAGAATTATGCACGACTGGTGGATAACGCTCTCTCCCTCGTGCGCCT CGGGAAGGAAAGGAATATTCCCGGCCTACATTTGCTATCTGATCACTTGGTAACGCTGGAGACTCTTGTC TATGAGGCTGGCTGTGACCCATCCTTGACGCTAAAGGATCTGCAGCAAATTAAGGACATTGACAAGCTGA GGTTGCTAATGGCAAATTCTTCTGAGGAACACTATGTGAAGAATGCCTACCAGTGGATGGTACCCTTCCT CCATCGGTGTGAGGCCCAGAAACCAGGCCTGGCCAATGAGCTTTTGAGGGACTACCTTGTGACTTTGGCA AAGGATGACCTAAAACTCCCACTGAAGGTGTTTCAACACTCCAAGCCAGATTGCCAACAGAAGCTCATTT CTGACCAGGACCAGCTGATGGTTATAGCCCTGGAGTCAATCTATGTCTGTGAGAGAGATGATCAGCTTGC CTTCTGTTACGACATTCTGGAGTGTCTTCCTCAGAGGGGATATGGCTGCGAGAGCGACGTGACTAAATCT CTGCACGACAAGGTAGATCAGTTGGAACAAATCCTCAGTGTTTCCGAGATATTGGAGAAGCACGGTCTGC AGAAGCCCATATCATTTGTGAAAGACACCCAGACGAGCACCGAGGAAGCCCGCAAGCTGATTGTCCGACT CACGAGGCACACGGGGCGCAAACAACCTCCAGTCAGTGAGAGCCATTGGAAGGGTTTGCTCCAAGATCTC CTAGAAATGCAGCAAAATGTGTACAAGTGTTTGGATGCAGATACTTGCTATGAGATATTTGCGGAAAGTT TGCTGTGCTCGGGTCGGTTGGAAAATATTCACTTGGCCGGGCAAATGATGCACTGCAACTCCTCGTCCAT AGATCTTCCGATGAGCATCACTTCAAAGGGCAAAGCCCAGTACAAGGTCAGCTTTGAGAAAAGCGTTGAG CTGGTATTGGCTGCAAGCAGAGAATACTTCAATTCATCAGCTACGCTAACGGATAACTGTATGGACTTGG CCAGGAGCTGTTTGCAGTTGATTTCCGACTGCCCGAATACCATTCAAGAGGAACTTGATTTGATACGCTC TCTGGGGTACTTAGAAGAATTTGGAGTAAAGATTTTGCCATTGCAAGTGCGTTTGTGTTCCAATCGCTTG AGTCTCATCAAGAAGTGTATTTCTCAGTGTCCAACCAGCTATAAGCAGTCTGCGAAACTCCTGACTCTCT CCAATCTGCTGAGACTTGCAGGCTGCGATGAGACGGACAGGAAAGGTCAAGTGCTGACACTTTTAGCCCA ACAGGCACTTTATTGTCAGGACTACAAAGCTGCCAGTGGACACTGCCAAGAACTTATGACTGCAGGCTAC AGTAAGTGCTGGGAGGTATGTAGCAAACTGGGACAGTCTGAGAACTATGATGACCTTGGAACACGTCAAG AGCTTATGGCTTATGCCCTGACCCACTGTCCCCCTGGCTCTATACAGACTCTCCTCGCCGCCAGCAGCTC CTTACAGACCCAGATTCTCTATCAAGCAGTCAGTTACCAGATCCAGCCAGGAGAAGTTGATGAACGGGAG AATTCCCATCACGCTGGACCTCCTGCTTTGTCCAGCAAAGATACCTGTCAGGCTGATACTAAGGCTCCGT CAGTGCAGTCTGCAGATTTATTGCAACGAACCACAGCTACGACCATGAAAGTGCTGACTAACACAACCAT GACCACTAAGGCTGTGCTGCATGCTGTGAGCGATGGACAATGGTGGAAAAAGTCACTAACCTACCTCCGA CCCTTGCAAGCTCAGGAATCGGGTGATGAAGTTATTAGGAGCGCCACCGAAGCTAATGTAAGAGTGGGAA AACAAGGCTGCCATCCTTTTTATGAGTCTTTAATCATCAATCCATTTATTGCTGAAAGTGAAGCGACGTA TTCCACATACCAGCAAAGTCCCCGGGAAAGCTTTGCTGAGGTGCTTCTGAGGACGGGCAAATTGGCAGAA ACAAAGAGTGAAGGAGAAAGCTTGTTCCCAGCAACTGAAGTCCTGTTGCAGTTGGCAAGTGACACGTTGC CAAACGATATCACCATGTCGGTGGCGTACTTGTTGGCATTACCGCAGGTGGTTGATGCCAACAAGTGCTT TGAAAAGCAATCGCATTCAGCTTTATCTCTCCAGCTGGCGGCTTATTACTATAGCCTGCAGATCTATTCT CATTTGGCTCCATGCTTCAAGGACAAGTGCCATCCTCTCTACGGGGCTGATCCCAATGAGATCATCAAGA TGGTTACGGTGTATGTTGCGGAATACGCCAACGCTAATTGGCCTATGGAATTGGTCACCTTGATTGAACA GTTGCATTATTATAACGAACGATTAATTGACTTCACCCAAGCCCAAATTCTTCAAGGACTTGGCAGAGGA GTGGACGTTCAGAGGTTTGCCAGTGACAGGCAATATAAAAGGGAAACCATTCTTGGCCTTACGGAGACGC TGGATGAAAATGTGTACAAGATTTCTCTCTCTCTGGCACAAAGATACCAAGTTCCACTGTGGGAAGTTTA TATGACGCACTTGGAATACTTATTTTCTGACAGCGGGTTATCCACAACAGAAATAGAAAGGAGGGCCCAA CATCTTGGCATCTTGGCCACCTTAAAAACCAACCCAGAGTCCTTTTACGAACACATGACTAAATATGTTT ATCCCACCATTGAAGGCAAAGACCTCCAGCGGTTGCTGTATTATTTTACACTTCTCGAGAACTGTGGCTC GTCTCAATATGTGAAGCATATCATTAAGCCAGACTCCCACATAAAGCTCCTGAAGAAACTGAAAGCAGTG GCATCAGGTCTTGATTACAAAAAGTTGACAGATGCCAACTTCAGTGCCCTGGAGTCCCTAGAATCTGTAC TCACCAGTCAGAATGTTCTGGCTGTTTCCAAACTGGCATCAAGGATCCCGGATGTGAATGGAGAGATGCT GACTTCTAGTGCTGTCCATTTGGCTTGGCTGAAGAAAGTCTTCTGGAATGGAGATCCTCAGGTCCTCAAA AAAGCTCCTGAGTCAGGAACAGAATGGTCCCATGCATACGATACCTGCCGAAAGTACCTTGAGAGGCTTA ATCCCAGTGACATCATTGCATTCACTGATGAAATTTCATTCTCTCCTCAAGCTGTTACTAAGTTGACAGT GGAAACAAGAACTGAGATGACTAAGAAAACGATCGCAGCAGTCAAGCAATTTATGGAAAAGCAAAGAAAA AAGAACCCTGGAGACAGCACCCAGATTTGTAACTCCTATGTCACATATGAGGTCGCCTTCAATCATCTAC AACAATCTCTTGTGCATCTAGAAACACTCAATCACGATTTCATCAAGCACTTGAGGAGCACAGACCAGGA CCGTTTGCAGAAATATTCCTATTTATATGATGTGTCAAGGTCAGATGAAGAGAAGATAAAGGAGCTGGCA ATAACAATGTGCATAAATGGAGAATCACTTGTCACCATCCAGAAGCTGCTTGAAGTTGCCGTAGGACCAT TGGGAATCAGTGCGAGGGATATTGTACACTATTCCACCGAGAAAATAATTCTCTCATTGAGAGGGAATGA ATCTGTGAAAGACCCTTTGAAAGTGTTGGAGAGTATTGTAAAAGAGGTTCATCTGAGTATCGAGAGAGGC GAGCAGTTGGTTTCCTCTGATGACCTTTTGGAGTGGCTTAGACCTTTCTGTGGAGATGACTCCTTGCCCG TAAAACCCAGAATTGATGTCCTGCAGATTATGGAGCAGACATTTAATCTAAGCGATGAAGACATCAAGTT GTTGGTGTTTTTCCGAACCCAAGCAGTTCTGAAAGCATCATGGCCTGATAAAAAGGTAGATGTGGATGAC ATTGAAAATGAAGAGAAAAGACACTCTCTTTTTATGGAGTTGTTGGATCTAAGTCACGATGCTACAGAGT TCCAGCATTTGGTTTTACTTTTACAAGCCTGGCCTCCCATGAAAGGTGCAGCGGTCGTGTCCTCTGAAGG AAACCCATGGGTAAAACTGGTGAATGCGATGCTCTCCAGCTGTGATGCAGAGCACAAAGAGGAAACATCC AACGAAATCCTCAAAATATGTCGTTCTCTATACAACTCTAGGCATATGCTGTCTGTAGAGTGCATAAAGG GGATATGTACACTGTTGCTAGACCACACAATGCTGCTGTCGCCACTGAAACTTCTACTGGAGAGCCATGA TAAAGATCTCCATTTTAAGGCACTGGGGCTCCTAACTGCAGCCAAGAAGGTCAGTGAGTTGAACTGTGAC GCAGAAATCCTTTCTTTGCTTCTGGACGCTAAGCTGGTTGTGAAATGTGTCAGCACTGTCTTTTACTCAC ATGTGATTAACCATTTGTTGTCCAAGCAAGAAGACACTCGGTGGGATGCGGAAGAGATCGCAAAGGAGCT TTATGACTGCGGATTTCATGCAGAGGCGGGATCCCTACTGATGACCTACAGAGGCACACATCCGGCTCTA AAAACCTTCACCTCTGCTCTTACCAGTATTAAACGCTGGTTTTAAAAACTTTGAAAGAACATGATTTCAA AAGGTGCCTACAGGTCTATATAAGTGCTACTAACCTCCCATCACTTTGCATTAAGGAAACCTTCAATATA ATGAATATTGTATAGAGCAGGTATTTGGATTCAAATGGGCAATGAAAGTTCTTTAAGTTTCACAAGTGGA CCTCTTAATCAGAATGCCAACTGTCATCATCATGAAACACGTTGGTGACACATGCTTTAGATAAGTCTGC ATGCGAAGTTTATTGACATTTATTATTTACACAAAGGTGTGTTTGCCTTCCAACATGCTCAAGTTGGACA GTTGGTAAAGCCGTCTTTTAGTCAGGGATGTCCAGTTTGGCCTGAGGTCCTGACTGTTCCCTGGTCTGGG CAAAAAGTCTAAAATCCTAACTGGTAAACGCCCATTCATACTTTCTTAAATCTTCTGGGCCATAACATCC TAACAATCCTAAGAAAACATGTTATCTAGATAAGTGGGTAATTAGTGCTGGCAACGTGGCGGCCATGTTT TAAAGAACTCTTGTTTGATCAGATTCAGGTCAGTAGTAATTTACTTATTTGTGGCGTCACAGGAAATCTC TGAACTCTGTCCTATATGTGTGGACTCTGATGTCTAGAGACGAGACCCCCTAATCTAGAGGTTATTTCTA TTGCTTATTATTGCTTATTTAATTGTTGTAACATCTGACACAAGCCCTTATAACTTATCGTGTGCTGCTG CCATTTTAATTCTATGTAAGGGATAACTGGTAGGAAAATCTTGTGTATGTTTTCATAAAACTCAAAATCC ACATTAATATCTTTATTCCAATTCAATAAAATTAATCTGCCTGATAAA
???blast.query.upload???
???blast.options???
???blast.eval???
???blast.eval.01???
???blast.eval.10???
???blast.eval.1???
???blast.eval.001???
???blast.eval.minus5???
???blast.eval.minus25???
???blast.eval.minus50???
???blast.eval.minus100???
???blast.numalign???
???blast.numalign.25???
???blast.numalign.1???
???blast.numalign.5???
???blast.numalign.50???
???blast.numalign.100???
???blast.wordsize???
???blast.wordsize.default???
???blast.wordsize.2???
???blast.wordsize.3???
???blast.wordsize.4???
???blast.wordsize.5???
???blast.wordsize.6???
???blast.wordsize.7???
???blast.wordsize.8???
???blast.wordsize.9???
???blast.wordsize.10???
???blast.wordsize.11???
???blast.wordsize.12???
???blast.wordsize.13???
???blast.wordsize.14???
???blast.wordsize.15???
???blast.wordsize.default.message???
???blast.matrix???
???blast.matrix.blosum62???
???blast.matrix.blosum45???
???blast.matrix.blosum80???
???blast.matrix.pam30???
???blast.matrix.pam70???
???blast.gapedalgin???
???blast.true???
???blast.false???
Automatically set to False for sequences longer than 4500 bytes
???blast.filtering???
???blast.on???
???blast.off???
BLAST time is limited to 30 seconds