Click here to close
Hello! We notice that you are using Internet Explorer, which is not supported by Xenbase and may cause the site to display incorrectly. We suggest using a current version of
Chrome
,
FireFox
, or
Safari
.
???banner.login???
???banner.register???
Contact Us
Cite Xenbase
Search
Genes
Xenbase With Google
People
Labs
Organizations
Paper Authors
Paper Titles
Xenbase Accession
Clones
Anatomy Items
Disease Ontology
MIM Diseases
GO Terms
GEO Data Sets
Phenotypes
Genes
Xenbase With Google
People
Labs
Organizations
Paper Authors
Paper Titles
Xenbase Accession
Clones
Anatomy Items
Disease Ontology
MIM Diseases
GO Terms
GEO Data Sets
BLAST
Xenopus
mRNA
Xenopus
protein
X. laevis
10.1
(J-Strain)
X. laevis
9.2
(J-Strain)
X. tropicalis
10.0
(Nigerian)
X. tropicalis
9.1
(Nigerian)
Mitochondrial genomes
Other amphibian genomes
Genomes
Download
Xenopus
Genomes
X. laevis
v10.1
(J-Strain) on JBrowse
X. laevis
v9.2
(J-Strain) on JBrowse
X. tropicalis
v10.0
(Nigerian) on JBrowse
X. tropicalis
v9.1
(Nigerian) on JBrowse
Simple Synteny Search
JBrowse2 Tracks
JBrowse2 X. laevis v10.1 L vs S synteny
Xenbase UCSC Track Hub
Other amphibian genomes
on JBrowse
Expression
Expression Search
Anatomy Search
GEO Data @ Xenbase
RNA-Seq Visualization
miRNA Catalog
X. laevis
Protein Expression
Genes
Gene Search
Gene Search Tips
Gene Nomenclature
Gene Nomenclature FAQ
Phenotypes
Phenotype Search
Mutants
Disease Models
Disease Search
Xenopus
Phenotype Ontology (XPO)
Anatomy & Development
Anatomy Atlas
NF Development Stages (Classic)
NF Development Stages (Zahn Drawings)
Xenopus
Staging Landmarks Table
Development Stage Temperature Charts
Movies of
Xenopus
Embryos
Images of
Xenopus
Embryos
Images of adult
Xenopus
frogs
Cell Fate Maps
Xenopus
Anatomy Ontology (XAO)
Zahn Drawings
Reagents & Protocols
CRISPR & TALEN Support
???header.navigation.xenbaseSearchAntibodies???
???header.navigation.searchMorpholinos???
Guide RNAs (gRNA)
???header.navigation.searchORFeome???
Small Molecules Wiki
Protocols Wiki
Search Clones
Clone Libraries
Vectors
Obtain Frogs
Literature & Community
Search Papers
Find People
Find a Lab
Organizations
Job Postings
Xenopus
Community Groups
Meetings & Resources
Xenopus
White Paper
International
Xenopus
Board
Stock Center
Lines and Strains
Mutants
Transgenic Constructs
Clones
NXR
EXRC
NBRP
TEFOR
XLRRI
Download
Data Download
Gene Page Reports
Browse Download Site
Browse General Repository Site
BLAST Databases
???blast.header???
Download BLAST databases
???blast.blastType???
???blast.program.blastn???
???blast.program.blastp???
???blast.program.blastx???
???blast.program.tblastx???
???blast.program.tblastn???
???blast.database???
-- Genomes --
Xenopus laevis J-strain 10.1 Genome
Xenopus laevis J-strain 9.2 Genome
Xenopus laevis J-strain 9.1 Genome
Xenopus laevis J-strain 7.1 Genome
Xenopus laevis J-strain 6.0 Genome
Xenopus laevis outbred 1.0 Genome
Xenopus tropicalis 10.0 Genome
Xenopus tropicalis 9.1 Genome
Xenopus tropicalis 9.0 Genome
Xenopus tropicalis 8.0 Genome
Xenopus tropicalis 7.1 Genome
Xenopus tropicalis 4.1 Genome
-- mRNA --
Xenopus laevis and tropicalis mRNA
Xenopus laevis and tropicalis mRNA plus EST Clusters
Xenopus laevis and tropicalis mRNA plus CDS
Xenopus laevis mRNA plus EST Clusters
Xenopus tropicalis mRNA plus EST Clusters
Xenopus laevis and tropicalis EST
-- Protein --
Xenopus laevis and tropicalis Protein
-->
Xenopus laevis Protein
Xenopus tropicalis protein
???blast.query???
>XR_005966504.1 PREDICTED: Xenopus laevis regulator of G-protein signaling 12 L homeolog (rgs12.L), transcript variant X5, misc_RNA TCTGGCTGGGGAAGGGGAGGCAGGAGGAGGCTCCTATTGTCAACTGGGAAGAAAGTTCATTGTTGGGAGG GAGAGAGAGAACTTTTCAAATGCGACTTCCCTTCTGCTTGTGGCTGTTGGGCCAGGGCTGCCCGAGGAAA GCTTGTTCTGAGCCGGAGTCGACGGCATGCGCACTGAGGAACATCTGCCTGGCTTGAAGATTTCTCAACG CTATGTAGAAAAGTTGTTTTGTCCAGAACCCAAACCTTAGAAGTGAAACAAATGTACAGGCCAGCTGAAC CTATGAAAAGCCGTCTCAAAATGTCATCACGACTAAGAAGTGTGGAGGTGGCAAGAGGAAGAACAGGATA TGGTTTCACTCTCTACGGACAGTCCCCTTGTGTGATAAGTAGTGTCATCAAGGAAAGTCCAGCTGAGTTT GTTGGGCTGAAACCAGGAGATCAGATATGTGCTGTGAATGAGATCAACGTTAAGAATGCATCGTATGAAG ACGTAGTGAAACTGATAGGGAAATGTTCAGGTGTTCTGCATATGGTGATTGCCGAGGGAATCCATCACAT AGACTCATGTTCCAGTGATGAAGAACTTGCCTTCTATGAAGGGAAAACTTGTCTGAAGCCAAGGCCTGAT TCCAAAGCTTTGGGTATCAACCGAGCCAAGAGGGTTGTCGAGGAAATGCAGTCTGGAGGAATATTTAACA TGATCTTTGAAAGCCCTTCAGCTAGTGTTGCAAAATGTGATACTCGTGCACCGAAACAGAGGTCCAGATC TATGTCTGCCTCTCATTATGAAACGAGACGGGAAAAGGCAAATAAAGTAGATTTGCTCTCCAAGGAGGAG ATATCAAAGGTGCTGAGTAATGACTGTCTTTTCTCTAATGGGATGGACAATCTGGAGGATTTTGAGCTAG ATGCAAGTATTTTAAACGTTGGGATGGTTGTTGGATATCTCGGCTCTATTGAAATCCCTTCTACGAGTTC AAATCTTGAGTACGACAGTTTGCAGGCCATCCGTGGATGCATGAGGAGGTTGAGGGCTGAACAAAAAATA CATTCACTGGTGCTGATGAAGATAATGCACGACAGCATCCAGCTGTGCACTGATAAGAATGGAGCTATAG CTGTTTATCCTGCTGAAAAACTAGCATTTAGTGCTGTCTGCCCAGATGACAGAAGGTTTTTTGGCCTTGT CACCATGCAAAGCCCTGACGATCAAAGCTTGGCCGACGAAGAAGGGATTTTGAGGACATCCTGCCACGTA TTCATGGTAGACCCGGAATTGTTCCATCATAAAATACACCAAGGGATTTCCAGGCGATTTGGATTTGAAT GTACCCCAGATCCAGACACCAATGGTTGTCTAGAGTTCCCAACCTCGTCTTTGCCTGTGTTGCAGTTTAT CTCTGTGCTGTACAGAGACATGGGTGAACTGATCGAAGGAATGAGAGCGAGGGCTTTTCTGGACAACGAT GCAGATGCCCAACAGAATAACAGCACTAGCAGTAACAGCGACAGTGGAATTGGAAATTTCAACCAAGAAG AGAAACCCAATCGAGTGTTAGTTGTTGACTTAGGAACTGCACCAAGCAAACATATCCAACATCCACTACG AGAGGCTCCTGGAGGAAGAGGGCAGAGTCATCAGGCTGCTCTACACTGGAATGGTTATTGTAACGAAGAA GATGGACATTTCTCTTTACATGGAGGTCACGTTGATAAGCAGCAAAGCTTTAAGAAACATTTAGGCCCAT CGGCTCGTATTGAAGTTCCAGTGGTTCCAGCTAGAGGACCGGCACCCTCATCAAAGAAAGCAACGACTTT AGATGGAGGGGGTCAGAGGTGGTTGCCTGTTCATGTTATGCGGGACTGGCAGCACGGCAATATCAGTGAT CAGGAGTCTTACGCAGATTCTACAGATGGCTGGTCAAGCATTAATTGTGGAACCCTTCCTCCTCCCATGA ACAAAATTCCGGCTGACAGATACCGTGTTGAAGGGAATTTTGGGCAACCTCAGCCTGTAACTCGCAAAGT TGAAAGTTGGTCTAAAAAAGTGTTCGATGTACAAAATAAATTTGGAGCTCCACATAACTCTGCCAAAGCC AGAGAGGATAGAAAGAGCTCCAAAACTTCCCACTTGGCTCAGGCCCCACAGCGCTCTTCTGGTAGAAGGT CGTTTGGAAGATCTAAAAGGTTCAGCATCACTCGATCCCTGGATGACCTCGAGGCTGCCACAGTCTCCGA TGGAGAGCTGAATAGCACTGACCTGAAGGGATGCATCAGTGAGAACAGCCTGAGCAGCAATGCCAGCCTT CCCAGTGTGCAGAGCTGCAGGCGACTGGGGGAACGCAGGGTCGCCAGCTGGGCTGTGTCATTTGAGCGTT TACTGCAAGATCCTGTCGGGGTCCGATACTTCACGGAGTTTTTAAAGAAAGAATTTAGTGAAGAGAATAT ATTGTTCTGGCAATCGTGTGAATATTTCAGCCGCATTCCCGTCCACGACAAGAACGAGCTCTCCTACAGA GCCCGGGAAATCTTCAACAAGTTCCTGAGCAGCAAGGCCACAACTCCAGTGAACATTGACAGTCAAGCGC ACCTGGCCGACGATGTGCTCAATGCTCCTCACCCGGATATGTTTAAAGAGCAGCAACTCCAGATATTTAA TCTGATGAAGTTTGACAGCTACACAAGGTTCCTGAAATCCCACCTGTACCAGGAATGTATGCTGGCAGAA GTTGAGGGTCGGTCACTGCCTGATCCTCAGGAGATTCCCAGTAGCCCCACATCGAAGCACAGCATCAGCT CCGAACGATCCAACATCTCAACCCCAAAAAAGCAGCTGAGTAAGAAAAACAGATCCGGAAGGTCCCTCAA TGAAGAATCCGGAGGTGAAGACGATAACGAAAGGAAGAAGAAAGGGGCGTTCTTCTCTTGGTCCAGAAGT ATAAGTATTGGGAAGTCACAGAAGAAAAGAGAGAATGGGGATGATTGCTCCCATATCAACGGAGGGAACG TCAGGAGACGGGGATCGCAGGGTTCCGTATCTTCCTCAGCGAGTCTCGAGCTGATTAACTGCGGCTCTAA TGGAAATGCACTCGAGTTTGAATCTTCGAGAGTGTCTTCCTTGCAAGAGAGAGAGAAGTCCTCCAAGCAG TGCTACATCAGTCTCCCAGACGGTTCATGCTGTGCCATGCTCGTTAAACCTGGCCTCTCCATTAAGGACA TGCTGATGGGCCTATGCGAGAAACATGGATTCAACATTGCCGCTGTCGATCTTTTCTTAATCGGCGGGAA TAAGCCCCTTGTGTTGAGTCAGGACAGCAGCATTCTGGAATCTCGGGATCTCCGGATAGAAAAGCGGACT TTATTTCGGTTGGATCTTGTTCCAATTAACCGATCCGTGGGTCTCAAAGCTAAGCCTACCAAGCCTGTGA CAGAGGTTCTGCGGCCTGTGGTCGCTAAATACGGACTCAATCTTAGTGAACTTGTAGCAAGACTTAGCGG GGAGCATGAGTCTCTTGACCTGGGCCTTCCCATCTCCAATCTGGATGGCCAACGTGTGGTTCTAGAAGAA AAGGAGAGCCTCAGAGGGAAAGAGAAGCAGAAAGCACCTGTGTTAAAATTGAGCCCCACTGTGACAAGTG GACCCAGAAGTCCCACATCAGCGGGAGAGGACAGGCCCCTAATAAAGTCTGCCTCCATTAGACTGAGAAG GGAAAATGGCAAAGGTTCCAGAGATGTTCGACTACTGAATAAAGACGAGCCCGTTGTTCGGACGGGGAGA AAAAGGCAGCAAAAAATCAATTTGGACGAAGCAGAAGCATTCTTTGAAATGATTTCAAAAGCCCAGAGTA ACAGAGCAGAAGATCAGCGCGGTCTCCTACGCAAAGAAGACTTGGTCCTCCCAGACTTTCTTCGTTTGAG TCCGGGGGAATCTGCCTCCTCGACCCCGACCGCTTCCAATTCCAGCAACAAAAGGACTGGAAGGAAAGAC AGCGCAGATAATATGGCTCCTTCTTCTTCCCGTGCAATGAACGGTACAAGGCAAGAGACACCACCGAAGT TCACCGATAGACCTTTGAAATCAGGAGGTTTGGACAAGAGAGACAGGCCGGACTTTTTGCAAGCTGGCAG CAGGAAACCCTACTTCCCCTTTAGTGCTCCTCTTTCACCTATACCCCACGTACAAGAGCGGAACAAACCC GGCAAGGAGAGGCAATCCAGAGACTTGCCCTTGGACAATATACAGACCATAGAAGATGAGAATGTAGAAG ATCTGACCCTAGTAGCTGAAGGGGACATTAGCAGCCCCAACAGCACCTTACTACCACCTCCACCGAGTCC TCCTTGCGATCTGAGTAAGCTATCCGAGGCCAACTATTCACCCCCACCTACATTTATGGGTAGCCAAGAT AACTCTGGATATCAGAGATCAGGTATTTCTAGATTTTAATCTCTCCTTCTCTTTAGATCTCCCTCTCGTG TGTTTCATGATTTTTTTTTTTTTTGCTTCAAAAAAGCAGATGGTTGCACTTTAAAAAATAATGCAGAATT GCACATTTTTTTTTAAAAAAAGAATTCTCATGTTATTTTATTTTTCTAAACTTTAAATGTATATCGGATG AATTCCATAACACTAGTGCAGAACAGTAGGCGCGGCGGGATCCACCGGCTACAGACGTGCCAAATCTACC CGCATTAATATTTATTGATGCAGGTCCAGCAGATACTTTCATGTCCAACTTTTTGGACAGATTAAAACTC GTCTTCTGCCCAAGGTCATAGGGAATAAGATTCCATAGCAGGTGCTGTTATCTGGATAAGATTCCATAGT AGGTCCTGTTATCGGGATAAGATTCCATAGTAGGTCCTGTTAGCGGGATAAGATTCCATAGTAGGTCCTG TTATTGGGATAAGATTCCATAGTAGGTCCTGTTATCAGGATAAGATTCCATAGTAGGTCCTGTTATCGGG ATAAGATTCCATAGTAGGTCCTGTTATCGGGATAAGATTCCATAGTAGGTGATGTGACCAGGATAAGATT CCATAGTAGGTCCTGTTATCGGGATAAGATTCCATAGTAGGTACTGTTATCGGGATAAGATTCCATAGTA GGTGATGTGACCAGGATAAGATTCCATAGTAGGTCCTGTTATCGGGATAAGATTCCATAGTAGGTCCTGT TATCGGGATAAGATTCCATAGTAGGTGATGTGACCAGGATAAGATTCCATAGTAGGTCCTGTTATCGGGA TAAGATTCCATAGTAGGTCCTGTTATCGGGATAAGATTCCATAGTAGGTGATGTGATCGGGATAAGATTT CATGGTAGGTCCTGTTATCGGGATAAGATTCCATATTAGGTCCTGTTATCTGGATAAGATTCCATATTAG GTCCTGTTATCTGGATAAGATTCCATAGTAGGTCCTGTTATCCGGTTAAGGTTCCATAATAGGTGCCGTT ATTGTTCTAAGATTCCATAGTAGGTCCTGTTATTGGGATAAGATTCCATAGTAGGTACTGTTATCAGGAT AAAATTCCATAGTAGGTCCTGTTATTGGGATAAGATTCCATACTAGGTACTGTTATAGGGAATAGCTTTT CGAGGACTTTCCAAGGGCTAATTTTCTGTTGGGGTGTGTCGTATCTGCTTCCAAAAATAAGACGGGGTGA CATATTGCTGTCTCTACTTAAATGCCAGTTTTATGTATTTTATTGCCTTTTTAATACCAGGGTTTATCTG CCCTTTATTCTACCTTCCATACGGACAAAGTATGAGGCTCTAGACTGTAGTATCATTAATATTTCCAAAC TACGACTCCCAGCATTCCAATTTCAAAAGACTTATTAGTGGCGCTGGGAATTGTAGTTTCACAACCATTG GCAGTTGCCCATCTTTATCCCATTGCATACAATAAACAGTCTTCTCTGTATAAAAGCATTTAAGTATTGT GGCTACGTCTCACTTCATAGACTTCAGTAGTACAGCTTGATCTGTCCTTCTGAAGTTTAAGGAGCAGATC TCAGGGCAAGCAATATGGCCGCCCCCACACACATGTATAAATGCATTGTGGGTACAGTAACCAATGCCCT CTGTCTCATGGAAGATAAACGACTCCGCGTGAGACATTAGCGCTAGAGCAGCTGTAATAAGAATAAATAC TATTATTTATCAGCCATTAGTATCCACTTTTGACATAAGAGGGTATATCTTTCCCTTTGAAACCAGCATT TGTGTCCATACAGATGTACATATACAGACATACGTGTGAGTTACCGTGTAGCCCCCTGTTCAGTGTAAAT AGCCCGTATGTTTTATTCTCTATCAGTAGTGTATATGGACCCTTTTATTTTTATTTTTTTTAAGAATATT GATGGTGAAAATCGGTACAAATGGAAAAACAATGTTGTAAATATATAGAATATTCCTGTCTAGTTGATAT TTTTGTTAGAAGATGCCATAGACCTTATTTCTGATTGTTTTCACTGCTCAGACAGTAGTGATATCCATAT ATATATATATAATACACAAAAGCCATGAATATCTTGTAAATTATATCCTTATAAACGGTGAGTTCTGATG TCATCAGTTATAAACGGTGAGTTCTGATGTCATTTCTGTCACATGACTCACTGAAACTTGTGTATTATAA TAAATAAAGTACCCCCAGTTGCAAAATATGAGGATATTAGAAGTTACCTTCGGCCTTGTGCTTTTATATG GTCATGAAACTCCAATATCCTTATAATTTACTAGAGGGGGTACTTTATTCACTATATACAGTATGTACAG GACCGTGACGGCCATATTGGCTGTGCGGAGCATCGACTCCCAGAAGCTTCCGCTGGGATTCGCTGCTTCG CAACAGCTGGAGAGTCACGTTTGCCACTAATTTTATAGGATATTTCTTATTAAAAAAATGTATTTGGTAG AAGCAAAAAAAAAAAAAAAAGTGTTGTGTAGCATGCCTTGTGTATTGCAAAAAACTGATTTCTGGGTAAA AAGCCTTGCACTGCTAAGGTGCCTTAAAGGTATTCTACATTGTTATTCAACCAATGTCCACAGTCTTAGA TATTACTAATATTAGAGATTAGAAATATTAAAGAACATGCGCAACAAATGATCCTGTATGGTATGTTCTG AGGGGTGGTGTGTTCCTGCAATTTTAAAATATATTCACTGAATGGCGGCAAGACAAACATGTGATCTGTA TCTGATAGATGACGCTACAATAAGCAGCTATGATTTGGCCACAATCTATCCCACTAGTCAATAGTGCATA GGACCTCCATTGGCCTAATAGTCAAAGTGCTCCCCTCTATGAACACACCACCCCTTTAACACAAGGTTCT TAGGAATCATCACTACCAGTGATAGAGCCAACCAAATATTTTTAATTTTCCTTGAATTAAGTTATCTTGT ACCACCACAATCATTCGAATGTCGAATGCCTTTAAGAGCTCTCGGTAAATCGGTGAAATGATAAAATGCA AATAGAACCATGTCCAGCTTCTTCCTGAAATCCTTACGAATGACATAATCCAGGGCTGTGCTGTGACTAG TGCTTGTGGGCAAGTGCTTATTGACAGATATTTGGTAGTTATGGTGGTTTATTCCATATACGGTGGTGCC GTACAGCTCGGCCTCCAGTTCTTAAAGGCGGCACCATGAAATCATTAAATTGTGACATCATCAATGTTGA TTAACAGATATTCGGTAGTTATGGTGGTTTCTTCCATATACAGTGGTGCCGTACAGTTCTAAAAGGAAAT GCCATAAAGTCATTACATTGTGACGTCATCAACGTTGATTAACAGATATTCAGTAGTTATGGTGGTTTCT TCCATATACAGTGGTGCCATATAGCTGGGTCTCAAGTTCTTAAAAGATGGCGTCATAAAGCCATTACATG GTGACATCATCAACATTGATGAACCTCCTCTAACTACAGTCAGTTCTGCATTACAACATAAGCACTAGAG CTCCCGCCTTCTAAAGTCAACAGTGATGCTCTTGATATAGCGCCATACCTCATCCTATGGATGCGCCCTG TTTGCAGTAGAATCTGTCCTTCCAGGCCACCTCCAATTATACAAGCACCATAGACCTGTTGTGTTAAACT ACCACATATATATTCTGGTGAGAGTGTTTTAGGTGGGAAGGGGAGCTGGAAGCTGTTATAGAAAATCCAT ATTTATTGTAATGAAGCCACAAACATGCCCTTGGCCACAGCACAAGCCCGCATTGTGACGTCATTCCGAT TATTGATTTTTCCCCCCCCTGCATGCTAATTTCTCTCTTAGCTCTCCGAGTGATCAGGAATAGTGCATGT AAATAACCGTGCCGTTTCATCTGTAGATTGAGATGATCTTTTTCGCTTTGTAGATATCCTGATTGTAGAT GATTTGTGTGCATTTTGTATCTGTTCTTTCAAAATGTAATAAACACTGCCCCGTACATTGGGCTTCATCC A
???blast.query.upload???
???blast.options???
???blast.eval???
???blast.eval.01???
???blast.eval.10???
???blast.eval.1???
???blast.eval.001???
???blast.eval.minus5???
???blast.eval.minus25???
???blast.eval.minus50???
???blast.eval.minus100???
???blast.numalign???
???blast.numalign.25???
???blast.numalign.1???
???blast.numalign.5???
???blast.numalign.50???
???blast.numalign.100???
???blast.wordsize???
???blast.wordsize.default???
???blast.wordsize.2???
???blast.wordsize.3???
???blast.wordsize.4???
???blast.wordsize.5???
???blast.wordsize.6???
???blast.wordsize.7???
???blast.wordsize.8???
???blast.wordsize.9???
???blast.wordsize.10???
???blast.wordsize.11???
???blast.wordsize.12???
???blast.wordsize.13???
???blast.wordsize.14???
???blast.wordsize.15???
???blast.wordsize.default.message???
???blast.matrix???
???blast.matrix.blosum62???
???blast.matrix.blosum45???
???blast.matrix.blosum80???
???blast.matrix.pam30???
???blast.matrix.pam70???
???blast.gapedalgin???
???blast.true???
???blast.false???
Automatically set to False for sequences longer than 4500 bytes
???blast.filtering???
???blast.on???
???blast.off???
BLAST time is limited to 30 seconds
