Click here to close
Hello! We notice that you are using Internet Explorer, which is not supported by Xenbase and may cause the site to display incorrectly. We suggest using a current version of
Chrome
,
FireFox
, or
Safari
.
???banner.login???
???banner.register???
Contact Us
Cite Xenbase
Search
Genes
Xenbase With Google
People
Labs
Organizations
Paper Authors
Paper Titles
Xenbase Accession
Clones
Anatomy Items
Disease Ontology
MIM Diseases
GO Terms
GEO Data Sets
Phenotypes
Genes
Xenbase With Google
People
Labs
Organizations
Paper Authors
Paper Titles
Xenbase Accession
Clones
Anatomy Items
Disease Ontology
MIM Diseases
GO Terms
GEO Data Sets
BLAST
Xenopus
mRNA
Xenopus
protein
X. laevis
10.1
(J-Strain)
X. laevis
9.2
(J-Strain)
X. tropicalis
10.0
(Nigerian)
X. tropicalis
9.1
(Nigerian)
Mitochondrial genomes
Other amphibian genomes
Genomes
Download
Xenopus
Genomes
X. laevis
v10.1
(J-Strain) on JBrowse
X. laevis
v9.2
(J-Strain) on JBrowse
X. tropicalis
v10.0
(Nigerian) on JBrowse
X. tropicalis
v9.1
(Nigerian) on JBrowse
Simple Synteny Search
JBrowse2 Tracks
JBrowse2 X. laevis v10.1 L vs S synteny
Xenbase UCSC Track Hub
Other amphibian genomes
on JBrowse
Expression
Expression Search
Anatomy Search
GEO Data @ Xenbase
RNA-Seq Visualization
miRNA Catalog
X. laevis
Protein Expression
Genes
Gene Search
Gene Search Tips
Gene Nomenclature
Gene Nomenclature FAQ
Phenotypes
Phenotype Search
Mutants
Disease Models
Disease Search
Xenopus
Phenotype Ontology (XPO)
Anatomy & Development
Anatomy Atlas
NF Development Stages (Classic)
NF Development Stages (Zahn Drawings)
Xenopus
Staging Landmarks Table
Development Stage Temperature Charts
Movies of
Xenopus
Embryos
Images of
Xenopus
Embryos
Images of adult
Xenopus
frogs
Cell Fate Maps
Xenopus
Anatomy Ontology (XAO)
Zahn Drawings
Reagents & Protocols
CRISPR & TALEN Support
???header.navigation.xenbaseSearchAntibodies???
???header.navigation.searchMorpholinos???
Guide RNAs (gRNA)
???header.navigation.searchORFeome???
Small Molecules Wiki
Protocols Wiki
Search Clones
Clone Libraries
Vectors
Obtain Frogs
Literature & Community
Search Papers
Find People
Find a Lab
Organizations
Job Postings
Xenopus
Community Groups
Meetings & Resources
Xenopus
White Paper
International
Xenopus
Board
Stock Center
Lines and Strains
Mutants
Transgenic Constructs
Clones
NXR
EXRC
NBRP
TEFOR
XLRRI
Download
Data Download
Gene Page Reports
Browse Download Site
Browse General Repository Site
BLAST Databases
???blast.header???
Download BLAST databases
???blast.blastType???
???blast.program.blastn???
???blast.program.blastp???
???blast.program.blastx???
???blast.program.tblastx???
???blast.program.tblastn???
???blast.database???
-- Genomes --
Xenopus laevis J-strain 10.1 Genome
Xenopus laevis J-strain 9.2 Genome
Xenopus laevis J-strain 9.1 Genome
Xenopus laevis J-strain 7.1 Genome
Xenopus laevis J-strain 6.0 Genome
Xenopus laevis outbred 1.0 Genome
Xenopus tropicalis 10.0 Genome
Xenopus tropicalis 9.1 Genome
Xenopus tropicalis 9.0 Genome
Xenopus tropicalis 8.0 Genome
Xenopus tropicalis 7.1 Genome
Xenopus tropicalis 4.1 Genome
-- mRNA --
Xenopus laevis and tropicalis mRNA
Xenopus laevis and tropicalis mRNA plus EST Clusters
Xenopus laevis and tropicalis mRNA plus CDS
Xenopus laevis mRNA plus EST Clusters
Xenopus tropicalis mRNA plus EST Clusters
Xenopus laevis and tropicalis EST
-- Protein --
Xenopus laevis and tropicalis Protein
-->
Xenopus laevis Protein
Xenopus tropicalis protein
???blast.query???
>XM_041569953.1 PREDICTED: Xenopus laevis NEDD4 like E3 ubiquitin protein ligase L homeolog (nedd4l.L), transcript variant X9, mRNA AGTCAACTGTGAGAGCTCTCCCACTGGGGCTGCTCCTTTCTGATGGAAAAGGAGCAGCTGGGAAGATGCT GTTTCAGGCTCTCGCTGTGGGACACACACACAAGGGGGAAAAAAAAAATTAAAAAAAAAAAAAGGAACTT CCACCGGAGAGGGGGGACGACATCATGTGACTGCAGCCACCCTACCCTATGTGACAGTATGTAGATTGCT CTTGTCCAATCATTCATGGAATGCTGCTTGTCACTCGGGCTATTTCTGCTATCTGTTGCTATCAGCACCG CACTTCCAACACTTTAGCAGATGGGACACTTTTCCTTGGAGTTCGACTTTTTGAATTTTAACTTCTGGCA ACGTCTGCCCTGTTGTTCTCGCTCTCTCTCTGATTGTTTTTTGTTCCCCCCTCTATCCTCCGTGTGTTGT TCCAAATCATGGCCCACCGGCTACGGTTTCATTTTGGCTCTGGGCGAAGCAACACGGCTCCCGAGTCGGA TGTCCTAGAGCAGGAGAAGGAGGATGACTTCTTCATGGCATTCCACACGCTACCGAGGAGAAACGGCTCT CTCCATTTCTCGAGGCACGGATCGGATTGTGGGGAGAGCGAGCTTCCTGAAGAAGGGGCACTAAAAAGAA GCACCTCCATGTTCATCCCGCAGCTGCTGAACAACATCGACATACGTCCGACAAGAAGTTCGTCCGTCCA GATCTCACTGCAGCGCAATTCGGTCGATGGGCACGTTGATGAGTTTGAGGCGTCGGAGTTTCCAGACGAG GTACTTCCCTGTGAATTTGGGGACTTTAACGAGCATTACGTTTCGGCTGTGAGAAAAAATTCCTCTTCTG CGAGTAGTCCTCTAGATACTCCCGGAAATTCTCCTCCGCAGAGACGGGATACAGCCAGGCAACCTATCAA TGGAGCTGCCCCTTTCCTACCTCGGCTTTCAGTACGTCCCATGGTGGAACAGAATGGCCATATTAACTGT GCCACGGAAATGCAAGAAGAAGTGAGCATAACAACAAGTGGCCAAAACTCAAGTGGGATAAGGATAAACC ATCAGCCTTTAAGTCCGGATATACGACAGGTTAGACTGTTGTCCCCATGTCAGGAAAATCAGAACGGGTC TAATACTGAACCCAGGCGCTGGTCTCTACAGCATCTTCCGGACACCTCAGGGAGTCCTGGGAAAAGATGC TTTGTGTTCCAACTGCAGCAGTCTCAGACCGGGAGCACTAATCTGGGGGGAGAGTATAACTTTGGCTTTA CCGGAACGAAAGGCGACAGGTTGGTCCGATATCCTCGTATCAGACTGGAAAGAAGTACTTCATACCCACT ACAGCCCCGGCCTGAAAGCATCAGCCCAGTGGAAAATGGATTAAGCTCCGAGTCTGGGAATTGCAAGAAA GATTACGCTGAGATTCTGCCGAACGACTCCAGGGAGAGAACCTCACAGGGGCAAGGGTGCACCTTCAAAA TCAGACAAGAGCCGAATGTCCGGCAGCCACATTTTAGGATCCGTGTTACTCGTGGCAACGAGGATCAAAG TAAAGAGGAAGGGCAAGAGGCTCCTAGAAATTCTGCTTTGGGAAAGGCCATGACAAGAGATGATTTCTTG GGCCAAGTTGATGTTCCGCTGAACCACTTACCGACAGAAGATCCAACAATGGAAAGACCATACACATTCA AAGACTTCTTACTCAGACCAAGAAGCCACAAATCCCGGGTTAAGGGTTTCTTGAGACTGAAGATGGCCTA TTTGCCAAAGAACGGAATGCAGGAAGAAGAGAATAATGAGCACAGAGAAGAATCAGAGCAGGCCTGGGAT GTTGTGGACTCCAACGATTCAAGCTCTCCACATCAGCAAGAGCTCCCCGCTCCACCCATGCCACCGGGAT GGGAAGAAAAAGTGGACAATCTCGGGCGCACGTATTACGTCAACCATAATAACAAAACCACTCAGTGGCA AAGGCCAAGTCTCGTAGATGTTACATCCGAATCGGACAACAACATTCGGCACATACAGCAAGAGGCCCAC CGGGTGTTCCGCTCTCGGAGACATATCAGTGAAGACCTAGAACCTGACCATTTAGAAGGAGCGGGGGATG TTCCAGAGCCATGGGAAACTATTTCCGAGGAAATGACTTTGACGACAGACACGTTAAACCAATCTCTCCC GCCTCCTGCATCGCCGGATTCTCGGGCCAGCGCTCTGGAACTGTCTGAGGAGCTGAATAGGAGGCTGCGT ATTACCTCCGAGTCCAATGGGGAACAGTTTAGTTCTATGATTCAAACAGCTTGGGAGAGGCAAAAGCAGA GAGAACCGTCCACGCGATTGAGGTCTTGCAGTGTGACAGATGGTGTCGCCGATCAGGCTCATTTATCACT GCCGACCGTGGCCTATGTACACACTACTCCGGGTTTGCCATCGGGATGGGAGGAGAGGAAAGACGCTAAA GGCCGCACCTATTATGTCAATCATAACAATCGCACCACAACATGGACCAGACCTATTGTGCAGCACGCCG AGGACGGGGCAGTGGGATCTACTTCAAACAGTAGTAACCATCTTAGCGAGCCTCAGATCAGACGGCCTCG TAGTCTCAGTTCACCCACAGTTACCTTATCTGCACCACTCGAGGGCGCAAAAGACTTCCCCGTGCGCAGA GCAGTGAAGGACACCTTGTCCAACCCACAGTCTCCACAACCATCACCCTATCATTCTCCAAAACCACAGC ACAAAGGGGCCCAGAGCTTCTTACCACCGGGCTGGGAGATGAGAATAGCACCCAATGGCAGACCATTCTT TATTGACCATAACACAAAAACCACCACATGGGAGGATCCACGCCTGAAGTTTCCAGTTCACATGAGAACC AAAGCTTCGTTAAATCCGAATGATTTGGGTCCTCTCCCTCCGGGCTGGGAAGAAAGAATTCACGCAGACG GACGGACGTTCTATATAGATCACAGAAGCCCAGGGTTGAGGTGTCGAGACACAGGTACCAGCAACTCTGT GCCCCCCTACGACACCAAAATAACCCAATGGGAAGACCCGCGACTTCAGAATCCTGCCATAACTGGTCCT GCCGTCCCTTACTCCAGAGAATTTAAGCAGAAATACGACTACTTCAGAAAGAAGTTGAAGAAACCTGCGG ATATACCAAACCGATTTGAAATGAAGCTTCACAGAAACAACATTTTCGAAGAATCGTACAGGAGGATAAT GTCGGTGAAGCGGCCGGATGTCCTTAAAGCCAGATTGTGGATTGAATTTGAGTCGGAAAAGGGCCTCGAT TATGGGGGAGTCGCAAGGGAATGGTTCTTCCTTCTGTCCAAAGAGATGTTCAATCCGTACTACGGGCTGT TTGAATACTCTGCTACGGACAATTACACACTTCAAATAAATCCTAATTCGGGTCTTTGCAACGAAGATCA CCTTTCCTACTTCACGTTTATTGGTCGGATTGCCGGGCTCGCCGTGTTCCATGGAAAATTATTAGATGGT TTCTTCATAAGGCCATTCTACAAGATGATGCTGGGAAAACAAATAACGCTGAAAGACATGGAGTCAGTGG ACGGCGAATACTACAATTCTTTAAAATGGATCTTAGAAAATGACCCAACTGAGCTGGATCTCATGTTTTG CATAGATGAAGAAAACTTTGGTCAGACTTACCAGGTGGATCTGAAGCCGAACGGATCAGAGATGGTGGTG ACTAATGACAACAAGCGAGAATACATTGACCTCGTTATCCAATGGAGGTTTGTTAATCGGGTACAGAAGC AGATGAACGCCTTTTTAGAAGGTTTTACTGAACTCATTCCTATTGATCTGATCAAAATCTTTGATGAAAA TGAGCTGGAGTTACTAATGTGTGGGCTCGGTGATGTTGATGTGAACGACTGGAGGCAACATACACTGTAT AAGAACGGCTACTGCCCTAACCACCCGGCCATACAGTGGTTTTGGAAGGCAGTGTTATTAATGGATGCCG AGAAACGCATACGCTTGCTGCAGTTTGTAACTGGGACGTCACGTGTGCCTATGAATGGATTTGCTGAACT ATACGGTTCAAATGGTCCTCAGCTGTTTACAATCGAGCAGTGGGGAAGTCCAGAGAAACTGCCCAGAGCT CACACATGCTTTAACCGTCTGGACTTACCTCCGTACGACTCGTTTGAAGATCTACGGGAGAAGCTCCTCA TGGCCGTGGAGAACGCTCAGGGTTTCGAAGGTGTAGATTAAGAAGGCCCCGTCTCTCTCTCTCTCTCTCC AGCTTGCACTGGGAACTTGTCACACGGATATTACCACTGATATAGGAGGGACAATTGCAAATACACGGAT ACAAAATCAATTCCTCCGTGTCCGTTTTGTGTAAGCGACACATAGAGCCGACCGCAGGACGAGTGGGAAC GGCGCTTACCGGCAAAAACGGCACCATTTTCCTTTGTGAATTGCTCCAGACAGACAGACAATGGCTCAGA CTGTGCCAATATGGAAGCCTTTCTCCGGTGTCTTTGCCAAACGGCCCCTGATATGGGTTCTGCAGCGCAG GTGCTCGTTTCAGGCGTTGCCATGACGACGGATGGCGTTACGTGATTGAGATATCCCAGGCTCTCCGGGC CTACACTTTACACCACATTTCAGGAGGACTCGCTCTATTTATGTGGCGCCTCGTCCAAGCCCTCGACACG TATTTTACACAACTTTCTAACGAATGGAACTAATCACATCAAATGTATAGTATTAAACCTCATGTTTACT TTTTAAAATGATTTAGACCTCTTTTCAGATTTTATTTCAATTTAATTAAAGCGACATACTCAAAGAACAC GAGCCATCTTTCCTTCAATGCCCCAAAGTCCTGACGAAGGCCATGTTGGTGTGGAGAAGCAACCGTTCTG CTCCCCGACGGAGGCCTCTATAGACCAAAAAACCCCCCCTGCATGTTATCATGCTCTCTAGTGGCCTCGG TATCGCCCCCTGCTGCCCACGTATTCACATTGATTTCTGTATTTCCATTGGTGACTGTAATTAACAGGCG ATGCAATGATTTTTTTTATTTTACGGAAGCATGTCAGGAATATTATTGGTGATCTATACATCTATTATAG TGTTCATTCATGCTTGGAAATATTTATGTTGTTGTTAAAACTGTACAGAAATTCATACTTTTTATTATCA ACTATTGCGCTTCTCTTTTTGTCGCTGGGAGACGGCCATAACGAGTGTCAGCTCTGCACCCAGTGCCGCG GCCTCTCCCACGTTATCTGATCTGCACCTGATTAGAAGGCACTTTAATTGTCTAAACGATTCTTTTTCTT CACCTCCCAATCACCGTGACACTGTCCTTTTCTATGGAGATAAACCTTTCTACACCTTTCAGGCTGTTGT TGTATAAAAAAAAAAGACAGTGAATGTAGCGTTCAGCCTTATTGCTATGCCGACTGTCATTTTACCTTTT GTGGGTCACCGAATCACCCCAATATTATTATTTTATTATTTGTCACTGTTCTGATGAGCTTGTTGCATGC CTATACTGTAGTGCCTGAACTTGTCTCTTGTGATTCCTCCTTGATTTCACTGCAAAATAGAATGTGAAAG GAAACTGATAGCGTAGAATTATCTGTTATGCCAGTCTCCGCTCAAACTGTGTAACGTTTCACTGGTGGAA ATGATGCAAATGAACGAAACCATAAAACGGGCAAAAAAAACCATAAAA
???blast.query.upload???
???blast.options???
???blast.eval???
???blast.eval.01???
???blast.eval.10???
???blast.eval.1???
???blast.eval.001???
???blast.eval.minus5???
???blast.eval.minus25???
???blast.eval.minus50???
???blast.eval.minus100???
???blast.numalign???
???blast.numalign.25???
???blast.numalign.1???
???blast.numalign.5???
???blast.numalign.50???
???blast.numalign.100???
???blast.wordsize???
???blast.wordsize.default???
???blast.wordsize.2???
???blast.wordsize.3???
???blast.wordsize.4???
???blast.wordsize.5???
???blast.wordsize.6???
???blast.wordsize.7???
???blast.wordsize.8???
???blast.wordsize.9???
???blast.wordsize.10???
???blast.wordsize.11???
???blast.wordsize.12???
???blast.wordsize.13???
???blast.wordsize.14???
???blast.wordsize.15???
???blast.wordsize.default.message???
???blast.matrix???
???blast.matrix.blosum62???
???blast.matrix.blosum45???
???blast.matrix.blosum80???
???blast.matrix.pam30???
???blast.matrix.pam70???
???blast.gapedalgin???
???blast.true???
???blast.false???
Automatically set to False for sequences longer than 4500 bytes
???blast.filtering???
???blast.on???
???blast.off???
BLAST time is limited to 30 seconds
