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Secondary structure of the Dictyostelium discoideum small subunit ribosomal RNA.
Olsen GJ
,
McCarroll R
,
Sogin ML
.
Abstract
We have used comparative analyses of prokaryotic and eukaryotic small subunit ribosomal RNAs to deduce a secondary structure for the Dictyostelium discoideum 18S rRNA. Most of the duplex regions are evolutionarily conserved in all organisms. We have taken advantage of the variation to the D. discoideum sequence (relative to the yeast and frog 19S rRNAs) to identify additional helical regions which are common to the eukaryotic 18S rRNAs.
Brosius,
Complete nucleotide sequence of a 16S ribosomal RNA gene from Escherichia coli.
1978, Pubmed
Brosius,
Complete nucleotide sequence of a 16S ribosomal RNA gene from Escherichia coli.
1978,
Pubmed
Carbon,
The sequence of the ribosomal 16S RNA from Proteus vulgaris. Sequence comparison with E. coli 16S RNA and its use in secondary model building.
1981,
Pubmed
Dron,
Sequence of the chloroplast 16S rRNA gene and its surrounding regions of Chlamydomonas reinhardii.
1982,
Pubmed
Eperon,
Distinctive sequence of human mitochondrial ribosomal RNA genes.
1980,
Pubmed
Fox,
5S RNA secondary structure.
1975,
Pubmed
,
Xenbase
Gauss,
Compilation of tRNA sequences.
1983,
Pubmed
Graf,
Nucleotide sequence of a Euglena gracilis chloroplast gene coding for the 16S rRNA: homologies to E. coli and Zea mays chloroplast 16S rRNA.
1982,
Pubmed
Gupta,
Sequence of the 16S Ribosomal RNA from Halobacterium volcanii, an Archaebacterium.
1983,
Pubmed
Hori,
The nucleotide sequence of 5S rRNA from a cellular slime mold Dictyostelium discoideum.
1980,
Pubmed
Hori,
Evolutionary change in 5S RNA secondary structure and a phylogenic tree of 54 5S RNA species.
1979,
Pubmed
Kelly,
Chemical modification studies and the secondary structure of HeLa cell 5.8S rRNA.
1980,
Pubmed
Küntzel,
Evolution of rRNA and origin of mitochondria.
1981,
Pubmed
MacKay,
Comparative sequence analysis as an approach to evaluating structure, function, and evolution of 5S and 5.8S ribosomal RNAs.
1982,
Pubmed
Mankin,
Modification of 18 S rRNA in the 40 S ribosomal subunit of yeast with dimethyl sulfate.
1981,
Pubmed
Müller,
The structure of the RNA binding site of ribosomal proteins S8 and S15.
1979,
Pubmed
Nazar,
Structural analyses of mammalian ribosomal ribonucleic acid and its precursors. Nucleotide sequence of ribosomal 5.8 S ribonucleic acid.
1975,
Pubmed
Ninio,
Prediction of pairing schemes in RNA molecules-loop contributions and energy of wobble and non-wobble pairs.
1979,
Pubmed
Noller,
Secondary structure of 16S ribosomal RNA.
1981,
Pubmed
Olsen,
Nucleotide sequence of Dictyostelium discoideum 5.8S ribosomal ribonucleic acid: evolutionary and secondary structural implications.
1982,
Pubmed
Rich,
Transfer RNA: molecular structure, sequence, and properties.
1976,
Pubmed
Rubtsov,
The structure of the yeast ribosomal RNA genes. I. The complete nucleotide sequence of the 18S ribosomal RNA gene from Saccharomyces cerevisiae.
1980,
Pubmed
Salim,
Nucleotide sequence of Xenopus laevis 18S ribosomal RNA inferred from gene sequence.
1981,
Pubmed
,
Xenbase
Salser,
Globin mRNA sequences: analysis of base pairing and evolutionary implications.
1978,
Pubmed
Sor,
[Nucleotide sequence of the gene for the mitochondrial 15S ribosomal RNA of yeast].
1980,
Pubmed
Stiegler,
A general secondary-structure model for procaryotic and eucaryotic RNAs from the small ribosomal subunits.
1981,
Pubmed
,
Xenbase
Tinoco,
Improved estimation of secondary structure in ribonucleic acids.
1973,
Pubmed
Ursi,
The sequence of the 5.8 S ribosomal RNA of the crustacean Artemia salina. With a proposal for a general secondary structure model for 5.8 S ribosomal RNA.
1982,
Pubmed
Van Etten,
Precise localization and nucleotide sequence of the two mouse mitochondrial rRNA genes and three immediately adjacent novel tRNA genes.
1980,
Pubmed
Walker,
Enzymatic and chemical structure mapping of mouse 28S ribosomal ribonucleic acid contacts in 5.8S ribosomal ribonucleic acid.
1982,
Pubmed
Zimmermann,
Binding sites for ribosomal proteins S8 and S15 in the 16 S RNA of Escherichia coli.
1979,
Pubmed