Click here to close
Hello! We notice that you are using Internet Explorer, which is not supported by Xenbase and may cause the site to display incorrectly.
We suggest using a current version of Chrome,
FireFox, or Safari.
Proc Natl Acad Sci U S A
2011 Jul 19;10829:12149-54. doi: 10.1073/pnas.1104480108.
Show Gene links
Show Anatomy links
Structural basis for alcohol modulation of a pentameric ligand-gated ion channel.
Howard RJ
,
Murail S
,
Ondricek KE
,
Corringer PJ
,
Lindahl E
,
Trudell JR
,
Harris RA
.
???displayArticle.abstract???
Despite its long history of use and abuse in human culture, the molecular basis for alcohol action in the brain is poorly understood. The recent determination of the atomic-scale structure of GLIC, a prokaryotic member of the pentameric ligand-gated ion channel (pLGIC) family, provides a unique opportunity to characterize the structural basis for modulation of these channels, many of which are alcohol targets in brain. We observed that GLIC recapitulates bimodal modulation by n-alcohols, similar to some eukaryotic pLGICs: methanol and ethanol weakly potentiated proton-activated currents in GLIC, whereas n-alcohols larger than ethanol inhibited them. Mapping of residues important to alcohol modulation of ionotropic receptors for glycine, γ-aminobutyric acid, and acetylcholine onto GLIC revealed their proximity to transmembrane cavities that may accommodate one or more alcohol molecules. Site-directed mutations in the pore-lining M2 helix allowed the identification of four residues that influence alcohol potentiation, with the direction of their effects reflecting α-helical structure. At one of the potentiation-enhancing residues, decreased side chain volume converted GLIC into a highly ethanol-sensitive channel, comparable to its eukaryotic relatives. Covalent labeling of M2 positions with an alcohol analog, a methanethiosulfonate reagent, further implicated residues at the extracellular end of the helix in alcohol binding. Molecular dynamics simulations elucidated the structural consequences of a potentiation-enhancing mutation and suggested a structural mechanism for alcohol potentiation via interaction with a transmembrane cavity previously termed the "linking tunnel." These results provide a unique structural model for independent potentiating and inhibitory interactions of n-alcohols with a pLGIC family member.
Alifimoff,
Anaesthetic potencies of primary alkanols: implications for the molecular dimensions of the anaesthetic site.
1989, Pubmed
Alifimoff,
Anaesthetic potencies of primary alkanols: implications for the molecular dimensions of the anaesthetic site.
1989,
Pubmed
Baenziger,
3D structure and allosteric modulation of the transmembrane domain of pentameric ligand-gated ion channels.
2011,
Pubmed
Bertaccini,
Normal-mode analysis of the glycine alpha1 receptor by three separate methods.
2007,
Pubmed
Bertaccini,
Homology modeling of a human glycine alpha 1 receptor reveals a plausible anesthetic binding site.
2005,
Pubmed
Bocquet,
X-ray structure of a pentameric ligand-gated ion channel in an apparently open conformation.
2009,
Pubmed
Bocquet,
A prokaryotic proton-gated ion channel from the nicotinic acetylcholine receptor family.
2007,
Pubmed
,
Xenbase
Borghese,
Sites of excitatory and inhibitory actions of alcohols on neuronal alpha2beta4 nicotinic acetylcholine receptors.
2003,
Pubmed
,
Xenbase
Bradley,
The effects of alcohols and diols at the nicotinic acetylcholine receptor of the neuromuscular junction.
1984,
Pubmed
Brejc,
Crystal structure of an ACh-binding protein reveals the ligand-binding domain of nicotinic receptors.
2001,
Pubmed
Cardoso,
Effects of ethanol on recombinant human neuronal nicotinic acetylcholine receptors expressed in Xenopus oocytes.
1999,
Pubmed
,
Xenbase
Cheng,
Molecular dynamics simulations of ethanol binding to the transmembrane domain of the glycine receptor: implications for the channel potentiation mechanism.
2008,
Pubmed
Crabbe,
Alcohol-related genes: contributions from studies with genetically engineered mice.
2006,
Pubmed
Dellisanti,
Crystal structure of the extracellular domain of nAChR alpha1 bound to alpha-bungarotoxin at 1.94 A resolution.
2007,
Pubmed
Duret,
Functional prokaryotic-eukaryotic chimera from the pentameric ligand-gated ion channel family.
2011,
Pubmed
,
Xenbase
Ernst,
Comparative models of GABAA receptor extracellular and transmembrane domains: important insights in pharmacology and function.
2005,
Pubmed
Forman,
Anesthetic sites and allosteric mechanisms of action on Cys-loop ligand-gated ion channels.
2011,
Pubmed
Franks,
Partitioning of long-chain alcohols into lipid bilayers: implications for mechanisms of general anesthesia.
1986,
Pubmed
Gonzalez-Gutierrez,
Bridging the gap between structural models of nicotinic receptor superfamily ion channels and their corresponding functional states.
2010,
Pubmed
Harris,
Ethanol's molecular targets.
2008,
Pubmed
Hibbs,
Principles of activation and permeation in an anion-selective Cys-loop receptor.
2011,
Pubmed
Hilf,
Structure of a potentially open state of a proton-activated pentameric ligand-gated ion channel.
2009,
Pubmed
Ho,
HOLLOW: generating accurate representations of channel and interior surfaces in molecular structures.
2008,
Pubmed
Howard,
Alcohol-binding sites in distinct brain proteins: the quest for atomic level resolution.
2011,
Pubmed
Humphrey,
VMD: visual molecular dynamics.
1996,
Pubmed
Jung,
Functional and structural analysis of the GABAA receptor alpha 1 subunit during channel gating and alcohol modulation.
2005,
Pubmed
,
Xenbase
Kumar,
Regulation of native GABAA receptors by PKC and protein phosphatase activity.
2005,
Pubmed
Le Guilloux,
Fpocket: an open source platform for ligand pocket detection.
2009,
Pubmed
Mascia,
Specific binding sites for alcohols and anesthetics on ligand-gated ion channels.
2000,
Pubmed
,
Xenbase
Mascia,
Enhancement of homomeric glycine receptor function by long-chain alcohols and anaesthetics.
1996,
Pubmed
,
Xenbase
Mihic,
Sites of alcohol and volatile anaesthetic action on GABA(A) and glycine receptors.
1997,
Pubmed
,
Xenbase
Murail,
Microsecond simulations indicate that ethanol binds between subunits and could stabilize an open-state model of a glycine receptor.
2011,
Pubmed
Nakahiro,
Potentiation of GABA-induced Cl- current by a series of n-alcohols disappears at a cutoff point of a longer-chain n-alcohol in rat dorsal root ganglion neurons.
1996,
Pubmed
Nury,
One-microsecond molecular dynamics simulation of channel gating in a nicotinic receptor homologue.
2010,
Pubmed
Nury,
X-ray structures of general anaesthetics bound to a pentameric ligand-gated ion channel.
2011,
Pubmed
Olsen,
Plasticity of GABAA receptors in brains of rats treated with chronic intermittent ethanol.
2005,
Pubmed
Parikh,
Structure of the M2 transmembrane segment of GLIC, a prokaryotic Cys loop receptor homologue from Gloeobacter violaceus, probed by substituted cysteine accessibility.
2011,
Pubmed
Pettersen,
UCSF Chimera--a visualization system for exploratory research and analysis.
2004,
Pubmed
Pratt,
Identification of sites of incorporation in the nicotinic acetylcholine receptor of a photoactivatible general anesthetic.
2000,
Pubmed
Pringle,
Can the lipid theories of anesthesia account for the cutoff in anesthetic potency in homologous series of alcohols?
1981,
Pubmed
Rohl,
Protein structure prediction using Rosetta.
2004,
Pubmed
Taly,
Normal mode analysis suggests a quaternary twist model for the nicotinic receptor gating mechanism.
2005,
Pubmed
Trudell,
Are sobriety and consciousness determined by water in protein cavities?
2004,
Pubmed
Ueno,
Tryptophan scanning mutagenesis in TM2 of the GABA(A) receptor alpha subunit: effects on channel gating and regulation by ethanol.
2000,
Pubmed
,
Xenbase
Unwin,
Refined structure of the nicotinic acetylcholine receptor at 4A resolution.
2005,
Pubmed
Weng,
Anesthetic sensitivity of the Gloeobacter violaceus proton-gated ion channel.
2010,
Pubmed
,
Xenbase
Wick,
Mutations of gamma-aminobutyric acid and glycine receptors change alcohol cutoff: evidence for an alcohol receptor?
1998,
Pubmed
,
Xenbase
Wood,
Short chain and long chain alkanols have different sites of action on nicotinic acetylcholine receptor channels from Torpedo.
1991,
Pubmed
Zhu,
The role of G proteins in the activity and ethanol modulation of glycine-induced currents in rat neurons freshly isolated from the ventral tegmental area.
2005,
Pubmed
Zuo,
Dual action of n-alcohols on neuronal nicotinic acetylcholine receptors.
2001,
Pubmed