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Biophys J
2015 Dec 01;10911:2268-76. doi: 10.1016/j.bpj.2015.08.054.
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Conformational Flip of Nonactivated HCN2 Channel Subunits Evoked by Cyclic Nucleotides.
Thon S
,
Schulz E
,
Kusch J
,
Benndorf K
.
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Hyperpolarization-activated cyclic nucleotide-modulated (HCN) channels are tetrameric proteins that evoke electrical rhythmicity in specialized neurons and cardiomyocytes. The channels are activated by hyperpolarizing voltage but are also receptors for the intracellular ligand adenosine-3',5'-cyclic monophosphate (cAMP) that enhances activation but is unable to activate the channels alone. Using fcAMP, a fluorescent derivative of cAMP, we analyzed the effect of ligand binding on HCN2 channels not preactivated by voltage. We identified a conformational flip of the channel as an intermediate state following the ligand binding and quantified it kinetically. Globally fitting the time courses of ligand binding and unbinding revealed modest cooperativity among the subunits in the conformational flip. The intensity of this cooperativity, however, was only moderate compared to channels preactivated by hyperpolarizing voltage. These data provide kinetic information about conformational changes proceeding in nonactivated HCN2 channels when cAMP binds. Moreover, our approach bears potential for analyzing the function of any other membrane receptor if a potent fluorescent ligand is available.
Figure 1. Time course of fcAMP binding and unbinding to HCN2 channels. (A) Ligand binding and current activation in channels preactivated by a voltage pulse from â30 to â130 mV in a representative patch. Application of fcAMP generated a time course of ligand binding and unbinding that consisted of a rapid and a slow component (blue trace, top) and an extra current component (black trace, bottom). The time course for binding (F) was normalized with respect to the steady-state binding at â130 mV and 15 μM fcAMP (Fmax). (B) Respective time course of ligand binding and unbinding for nonactivated channels at â30 mV in a representative patch. In the absence of current activation, fcAMP binding and unbinding are rapid. Same normalization as in (A). (C) Superimposition of normalized averaged time courses of binding and unbinding at â30 mV (n = 5) and â130 mV (n = 12).
Figure 2. Binding of fcAMP to nonactivated HCN2 channels at five concentrations. (A) Averaged time courses of binding and unbinding. The number of individual traces, n, included in each averaged trace is indicated. Each individual trace was obtained from a different patch. The traces are normalized with respect to the binding at â130 mV and 15 μM fcAMP (F/Fmax). (B) Steady-state concentration-binding relationship at â130 and â30 mV. Fit of the relationships with Eq. 1 (continuous curves) yielded â130 mV, BC50 = 0.61 μM, and H = 1.56 and â30 mV, BC50 = 2.46 μM, and H = 1.28. (C) Fit of the time courses (red curves) of fcAMP binding and unbinding with a single exponential using Eqs. 2a and 2b, respectively.
Figure 3. Global fit with a C-C model assuming independently operating subunits. (A) Scheme of model 1 (Table 1). L denotes a ligand. (B) Normalized and averaged traces of binding and unbinding at five fcAMP concentrations with superimposed curves (red) as best fit. (C) Fit of steady-state binding (F/Fmax) obtained by the same global fit as in (B). Fmax was determined at â130 mV and 15 μM fcAMP. Parameters: a = 8.58 à 105 Mâ1 sâ1, b = 2.20 sâ1, Ïr2 = 15.86.
Figure 4. Global fit with a model assuming binding and flipping of independent subunits. (A) Scheme of the model containing a ligand (L) binding step and a subsequent flip of only the same subunit (model 2 in Table 1). (B and C) Analog to Fig. 3. Parameters: a = 1.32 à 106 Mâ1 sâ1, b = 4.00 sâ1, c = 3.14 à 10â1 sâ1, d = 5.54 à 10â2sâ1, and Ïr2 = 12.63.
Figure 5. Global fit with a model containing four binding steps and one concerted flip. (A) Scheme of the model containing four ligand (L) binding steps and a concerted flip of all four subunits (model 5 in Table 1). (B and C) Analog to Fig. 3. The parameters are provided by Table 2.
Figure 6. Microscopic binding affinity for fcAMP in nonactivated and activated channels. The values of the equilibrium association constants KA1âKA4 obtained for model 5 (Table 1) are plotted for nonactivated channels (â30Â mV) and activated channels (â130Â mV). The values for the activated channels were obtained from a previous study (29). The values for the second and the third binding step at â30Â mV were set equal.
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