Click here to close Hello! We notice that you are using Internet Explorer, which is not supported by Xenbase and may cause the site to display incorrectly. We suggest using a current version of Chrome, FireFox, or Safari.

Summary Attributions Wiki
XB-MORPHOLINO-17249130
Morpholino Name: ahnak MO1
Synonyms: TNeu103f06, Xtnovel34
Target mRNA: ahnak

Morpholino Type: splice blocking morpholino
Sequence: 5' TTCTTCTTCTTCTTTATCCATCTTG 3'

Source: Gene Tools LLC


Target mRNA tropicalis laevis.L laevis.S
Identities 24/25 22/25 24/25
genome
MO
 
5' CTAGATGGATAAAGAAGAAGAAGAA 3'
   | |||||||||||||||||||||||
3' GTTCTACCTATTTCTTCTTCTTCTT 5'
 
5' CTAGATGGAGAAAGAAGAAGAAGAC 3'
   | ||||||| |||||||||||||| 
3' GTTCTACCTATTTCTTCTTCTTCTT 5'
 
5' CTAGATGGATAAAGAAGAAGAAGAA 3'
   | |||||||||||||||||||||||
3' GTTCTACCTATTTCTTCTTCTTCTT 5'
    
Genomic Alignments Position Identity Strand Target Target mRNA
laevis 10.1 Chr4S:1655584..1655608 24/25 Antisense target ahnak.S
Chr4L:27800977..27801001 22/25 Antisense target ahnak.L
Chr6L:48865152..48865176 23/25 Antisense off-target rarb.L
Chr5L:163949681..163949705 22/25 Antisense off-target elp3.L
Chr2L:122484516..122484540 22/25 Antisense off-target myo16.L
Chr2L:132546733..132546757 22/25 Sense off-target klf12.L
Chr2S:5492922..5492946 22/25 Sense off-target coro6.S
Chr5L:104240038..104240062 22/25 Sense off-target ephb3.L
Chr7L:136962692..136962716 22/25 Antisense off-target igsf21.L
Chr7L:136962844..136962868 22/25 Antisense off-target igsf21.L
Chr1L:229493276..229493300 22/25 Sense off-target LOC108718850
Chr2S:65609674..65609698 22/25 Antisense off-target LOC108709107
Chr4L:52405635..52405659 22/25 Antisense off-target LOC121403149
Chr4L:52405635..52405659 22/25 Antisense off-target LOC108705983
Chr4L:53577134..53577158 22/25 Antisense off-target LOC108714052
Chr4S:2464403..2464427 22/25 Antisense off-target LOC121393417
Chr4S:2544422..2544446 22/25 Antisense off-target LOC121393152
Chr5L:4016513..4016537 22/25 Sense off-target LOC108716082
Chr7L:17003179..17003203 22/25 Sense off-target LOC121395341
Chr8L:109313402..109313426 22/25 Antisense off-target LOC108699276
Chr2S:125884627..125884651 21/25 Sense off-target lcp1.S
Chr4L:92759206..92759230 21/25 Sense off-target dio1.L
Chr4S:19970488..19970512 21/25 Antisense off-target ctr9.S
Chr6S:13936405..13936429 21/25 Sense off-target pfkp.S
Chr8L:132265778..132265802 21/25 Antisense off-target il6r.L
Chr9_10L:43247303..43247327 21/25 Sense off-target raly.L
Chr1L:29585762..29585786 21/25 Sense off-target proml-1
Chr1S:187843002..187843026 21/25 Sense off-target rxfp3.S
Chr2L:88147384..88147408 21/25 Sense off-target rspo1.L
Chr2S:7155001..7155025 21/25 Antisense off-target trpv3.S
Chr3L:115644372..115644396 21/25 Antisense off-target mfge8.L
Chr3L:2464285..2464309 21/25 Sense off-target med21.L
Chr5S:7422385..7422409 21/25 Antisense off-target glp1r.S
Chr5S:7422516..7422540 21/25 Antisense off-target glp1r.S
Chr7S:109855167..109855191 21/25 Sense off-target fli1b.S
Chr7S:109856951..109856975 21/25 Sense off-target fli1b.S
Chr8L:132386040..132386064 21/25 Sense off-target kcnn3.L
Chr4L:130624638..130624662 21/25 Sense off-target cav3.1.L
Chr5L:2222189..2222213 21/25 Antisense off-target gpcpd1.L
Chr7S:111340538..111340562 21/25 Sense off-target igsf21.S
Chr9_10S:113914005..113914029 21/25 Antisense off-target sez6l2.S
Chr1L:57179254..57179278 21/25 Antisense off-target gucy1b1.L
Chr2S:167438589..167438613 21/25 Sense off-target stard10.S
Chr2S:49327112..49327136 21/25 Sense off-target atp6ap2.S
Chr8S:82071134..82071158 21/25 Sense off-target npdc1.2.S
Chr9_10L:465590..465614 21/25 Sense off-target stat3.2.L
Chr9_10L:52484834..52484858 21/25 Sense off-target bmerb1l.L
Chr1L:118537993..118538017 21/25 Antisense off-target slc25a51.L
Chr2L:33589574..33589598 21/25 Antisense off-target LOC108707439
Chr2S:12583739..12583763 21/25 Antisense off-target LOC108708858
Chr2S:24346108..24346132 21/25 Antisense off-target LOC108709082
Chr3L:98587185..98587209 21/25 Antisense off-target LOC108711307
Chr4L:149288049..149288073 21/25 Antisense off-target LOC108714735
Chr4S:11520627..11520651 21/25 Antisense off-target LOC108715220
Chr4S:5462631..5462655 21/25 Antisense off-target LOC108715188
Chr5L:156337118..156337142 21/25 Sense off-target LOC108717206
Chr6L:130588380..130588404 21/25 Antisense off-target LOC121394500
Chr6L:130639116..130639140 21/25 Antisense off-target LOC121394744
Chr6L:130760400..130760424 21/25 Antisense off-target LOC121394748
Chr6L:161610505..161610529 21/25 Sense off-target LOC108719466
Chr8L:123321403..123321427 21/25 Sense off-target LOC121397343
Chr8L:127765106..127765130 21/25 Antisense off-target LOC121397224
Chr9_10L:6464729..6464753 21/25 Sense off-target LOC108700860
Chr8L:127765125..127765149 21/25 Antisense off-target LOC121397224
Chr8L:127765144..127765168 21/25 Antisense off-target LOC121397224
Chr8L:59830379..59830403 21/25 Sense off-target LOC121397039
Chr9_10L:15212044..15212068 21/25 Sense off-target LOC108700932
Chr4S:2509064..2509088 22/25 unknown
Chr6L:6585380..6585404 22/25 unknown
Chr6L:91618051..91618075 22/25 unknown
Chr9_10L:106487825..106487849 22/25 unknown
Chr1L:227670491..227670515 22/25 unknown
Chr1L:230141569..230141593 21/25 unknown
Chr1S:147598137..147598161 21/25 unknown
Chr1S:172571688..172571712 21/25 unknown
Chr1S:198401054..198401078 21/25 unknown
Chr1S:3816815..3816839 21/25 unknown
Chr1S:62507642..62507666 21/25 unknown
Chr2L:181662118..181662142 21/25 unknown
Chr2L:81259729..81259753 21/25 unknown
Chr2L:86089351..86089375 21/25 unknown
Chr2S:161935004..161935028 21/25 unknown
Chr2S:28749507..28749531 21/25 unknown
Chr2S:28749526..28749550 21/25 unknown
Chr2S:21051226..21051250 21/25 unknown
Chr3L:2362698..2362722 21/25 unknown
Chr3L:3536716..3536740 21/25 unknown
Chr3L:3537252..3537276 21/25 unknown
Chr3L:65241135..65241159 21/25 unknown
Chr3S:3749039..3749063 21/25 unknown
Chr4L:10104547..10104571 21/25 unknown
Chr4L:151411891..151411915 21/25 unknown
Chr4L:46597759..46597783 21/25 unknown
Chr4S:16922452..16922476 21/25 unknown
Chr4S:33479292..33479316 21/25 unknown
Chr5L:141384548..141384572 21/25 unknown
Chr5S:44226002..44226026 21/25 unknown
Chr5L:165411605..165411629 21/25 unknown
Chr5L:22251721..22251745 21/25 unknown
Chr5L:22251815..22251839 21/25 unknown
Chr5S:21538174..21538198 21/25 unknown
Chr5S:32508743..32508767 21/25 unknown
Chr6S:63218919..63218943 21/25 unknown
Chr6L:135648969..135648993 21/25 unknown
Chr7L:4290050..4290074 21/25 unknown
Chr8S:22978074..22978098 21/25 unknown
Chr9_10L:15913242..15913266 21/25 unknown
Chr9_10L:15913401..15913425 21/25 unknown
Chr9_10L:2320508..2320532 21/25 unknown
Chr9_10L:43145368..43145392 21/25 unknown
Chr9_10L:46396231..46396255 21/25 unknown
Chr9_10L:53401329..53401353 21/25 unknown
Chr9_10S:49826031..49826055 21/25 unknown
Chr1L:143589971..143589995 21/25 unknown
Chr1L:20181533..20181557 21/25 unknown
Chr1L:224195984..224196008 21/25 unknown
tropicalis 10.0 Chr4:36700178..36700202 24/25 Antisense target ahnak
Chr1:198455140..198455164 24/25 Antisense off-target LOC100497037
Chr1:129790077..129790101 22/25 Antisense off-target smc5
Chr2:117801879..117801903 22/25 Antisense off-target myo16
Chr7:70289210..70289234 22/25 Antisense off-target tirap
Chr5:129592274..129592298 21/25 Sense off-target gk5
Chr2:155366860..155366884 21/25 Antisense off-target lnx2
Chr8:1475143..1475167 21/25 Sense off-target syn1
Chr1:99277489..99277513 21/25 Sense off-target thop1
Chr1:99277502..99277526 21/25 Sense off-target thop1
Chr10:47064367..47064391 21/25 Sense off-target myocd
Chr2:25995635..25995659 21/25 Sense off-target robo2
Chr3:138169760..138169784 21/25 Sense off-target atg4d
Chr3:138170047..138170071 21/25 Sense off-target atg4d
Chr8:66443788..66443812 21/25 Sense off-target lrch2
Chr8:81816482..81816506 21/25 Antisense off-target adad2
Chr9:48601802..48601826 21/25 Antisense off-target trpm2
Chr1:184685447..184685471 21/25 Sense off-target iqgap2
Chr1:65912019..65912043 21/25 Antisense off-target spata5
Chr4:8737467..8737491 21/25 Sense off-target lrrc4c
Chr6:148414925..148414949 21/25 Sense off-target adgrb1
Chr7:1375325..1375349 21/25 Sense off-target sorcs1
Chr3:987060..987084 21/25 Sense off-target slco1b3
Chr3:987246..987270 21/25 Sense off-target slco1b3
Chr6:7370910..7370934 21/25 Antisense off-target cry-dash
Chr1:5580622..5580646 21/25 Antisense off-target LOC116408400
Chr1:5580731..5580755 21/25 Antisense off-target LOC116408400
Chr3:138169760..138169784 21/25 Antisense off-target LOC105945363
Chr3:138170047..138170071 21/25 Antisense off-target LOC105945363
Chr4:112116870..112116894 21/25 Sense off-target LOC101733911
Chr7:20201760..20201784 21/25 Sense off-target LOC100486640
Chr9:7302025..7302049 21/25 Sense off-target LOC116407644
Chr1:183727278..183727302 22/25 unknown
Chr6:118128834..118128858 22/25 unknown
Chr1:169398223..169398247 21/25 unknown
Chr2:111548833..111548857 21/25 unknown
Chr2:179846077..179846101 21/25 unknown
Chr4:135398710..135398734 21/25 unknown
Chr4:8525233..8525257 21/25 unknown
Chr6:137795255..137795279 21/25 unknown
Chr2:143525701..143525725 21/25 unknown
Chr7:126811798..126811822 21/25 unknown
Chr7:56380406..56380430 21/25 unknown
Chr8:145673628..145673652 21/25 unknown
Chr8:18055072..18055096 21/25 unknown
Chr8:18377182..18377206 21/25 unknown
Chr8:20501652..20501676 21/25 unknown
Chr8:27255792..27255816 21/25 unknown
Chr9:29784145..29784169 21/25 unknown
Chr9:84692753..84692777 21/25 unknown
Publications
???morpholino.displaySummary.papersFirst??? Defining synphenotype groups in Xenopus tropicalis by use of antisense morpholino oligonucleotides., PLoS Genet 2006                                      
???morpholino.displaySummary.papersRecent???
???morpholino.displaySummary.papersAll???