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XB-MORPHOLINO-17250589

Morpholino Name: vegt MO5
Synonyms: VegT-MO
Target mRNA: vegt

Morpholino Type: uncategorized morpholino
Sequence: 5' CAGCAGCATGTACTTGGC 3'

Source: Gene Tools LLC


Target mRNA tropicalis laevis.L laevis.S
Identities 18/18 18/18 17/18
genome
MO
5' GCCAAGTACATGCTGCTG 3'
   ||||||||||||||||||
3' CGGTTCATGTACGACGAC 5'
5' GCCAAGTACATGCTGCTG 3'
   ||||||||||||||||||
3' CGGTTCATGTACGACGAC 5'
5' ACCAAGTACATGCTGCTG 3'
    |||||||||||||||||
3' CGGTTCATGTACGACGAC 5'
   
Genomic Alignments Position Identity Strand Target Target mRNA
laevis 10.1 Chr1L:165672461..165672478 18/18 Antisense target vegt.L
Chr1S:141994711..141994728 17/18 Antisense target vegt.S
Chr1L:22046598..22046615 17/18 Antisense off-target c4orf48.L
Chr7L:109674374..109674391 16/18 Sense off-target tnnt1.L
Chr7S:81852997..81853014 16/18 Antisense off-target cdk11b.S
Chr1L:115590914..115590931 16/18 unknown
Chr1L:214720411..214720428 16/18 unknown
Chr3S:70521902..70521919 16/18 unknown
Chr5L:160456911..160456928 16/18 unknown
Chr5S:1197812..1197829 16/18 unknown
Chr6L:41447850..41447867 16/18 unknown
tropicalis 10.0 Chr1:152855842..152855859 18/18 Antisense target vegt
Chr5:78955285..78955302 16/18 Antisense off-target pdss2
Chr9:20543262..20543279 16/18 Antisense off-target adcy9
Chr1:25811603..25811620 16/18 Antisense off-target stk32b
Chr1:57058192..57058209 16/18 unknown
Chr3:38113019..38113036 16/18 unknown
Chr3:39285155..39285172 16/18 unknown
Publications
First: The competence of Xenopus blastomeres to produce neural and retinal progeny is repressed by two endo-mesoderm promoting pathways., Dev Biol 2007          
Most recent:
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