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XB-GRNA-23659087
gRNA Name:
adprhl1 gRNA1
Synonyms: -e3-1S
Genomic Target: adprhl1
PAM Sequence: AGG
Sequence: 5' GGGATGAGATACTGGAAACC 3'
Synonyms: -e3-1S
Genomic Target: adprhl1
PAM Sequence: AGG
Sequence: 5' GGGATGAGATACTGGAAACC 3'
| Genomic Target | tropicalis | laevis.L | laevis.S | ||||
| Identities | 19/20 | 19/20 | 20/20 | ||||
genome
gRNA
|
5' GGTTTCCAGTATTTCATCCC 3'
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3' CCAAAGGTCATAGAGTAGGG 5' |
5' GGTTTCCAGTATTTCATCCC 3'
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3' CCAAAGGTCATAGAGTAGGG 5' |
5' GGTTTCCAGTATCTCATCCC 3' |||||||||||||||||||| 3' CCAAAGGTCATAGAGTAGGG 5' |
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Genomic Alignments  |
Position | Identity | Strand | Target | Genomic Target | ||
| laevis 10.1 | Chr2S:106629302..106629321 | 20/20 | Sense | target | adprhl1.S | ||
| Chr2L:120473842..120473861 | 19/20 | Sense | target | adprhl1.L | |||
| Chr7L:138065574..138065593 | 18/20 | Sense | off-target | atp13a2.L | |||
| Chr1S:79143719..79143738 | 17/20 | Antisense | off-target | uhrf1.S | |||
| Chr9_10S:85042297..85042316 | 17/20 | Sense | off-target | tmem114.S | |||
| Chr3L:64233369..64233388 | 16/20 | Sense | off-target | n6amt1.L | |||
| Chr1L:230730559..230730578 | 16/20 | Antisense | off-target | LOC108718947 | |||
| Chr3S:23827012..23827031 | 18/20 | Antisense | unknown | ||||
| Chr6S:122937618..122937637 | 18/20 | Antisense | unknown | ||||
| Chr1L:77186815..77186834 | 18/20 | Sense | unknown | ||||
| Chr6S:14579399..14579418 | 18/20 | Antisense | unknown | ||||
| Chr1L:92917350..92917369 | 18/20 | Antisense | unknown | ||||
| Chr3L:19108411..19108430 | 18/20 | Antisense | unknown | ||||
| Chr4S:82534898..82534917 | 17/20 | Antisense | unknown | ||||
| Chr5S:53549157..53549176 | 17/20 | Sense | unknown | ||||
| Chr8L:39575756..39575775 | 17/20 | Antisense | unknown | tropicalis 10.0 | Chr2:115903816..115903835 | 19/20 | Sense | target | adprhl1 |
| Chr5:98195604..98195623 | 17/20 | Sense | off-target | csmd1 | |||
| Chr3:83833008..83833027 | 16/20 | Sense | off-target | itih5 | |||
| Chr8:62921271..62921290 | 16/20 | Sense | off-target | dach2 | |||
| Chr3:1434827..1434846 | 17/20 | Antisense | unknown | ||||
| Chr1:123110050..123110069 | 16/20 | Antisense | unknown | ||||
| Chr5:122498658..122498677 | 16/20 | Antisense | unknown | ||||
| Publications | |||||||
| ???morpholino.displaySummary.papersFirst??? |
Defective heart chamber growth and myofibrillogenesis after knockout of adprhl1 gene function by targeted disruption of the ancestral catalytic active site., PLoS One 2020  |
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| ???morpholino.displaySummary.papersRecent??? | |||||||
| ???morpholino.displaySummary.papersAll??? | |||||||
