Xenbase is undergoing scheduled maintenance Wednesday, June 14 and Thursday, June 15, 2023. Xenbase will be unavailable on those days.

Click on this message to dismiss it.
Click here to close Hello! We notice that you are using Internet Explorer, which is not supported by Xenbase and may cause the site to display incorrectly. We suggest using a current version of Chrome, FireFox, or Safari.

Summary Attributions Wiki
XB-gRNA-23659321

gRNA Name: bhlhe22 gRNA1
Synonyms:
Genomic Target: bhlhe22

PAM Sequence: CGG
Sequence: 5' CGTGCATTCGCCTCCTCTCCCGG 3'



Genomic Target tropicalis laevis.L laevis.S
Identities 23/23 23/23 23/23
genomic

gRNA
5' CCGGGAGAGGAGGCGAATGCACG 3' ||||||||||||||||||||||| 3' GGCCCTCTCCTCCGCTTACGTGC 5' 5' CCGGGAGAGGAGGCGAATGCACG 3' ||||||||||||||||||||||| 3' GGCCCTCTCCTCCGCTTACGTGC 5' 5' CCGGGAGAGGAGGCGAATGCACG 3' ||||||||||||||||||||||| 3' GGCCCTCTCCTCCGCTTACGTGC 5'
Genomic Alignments Position Identity Strand Target Genomic Target
laevis 10.1 Chr6L:126289077..126289099 23/23 Antisense target bhlhe22.L
Chr6S:103886714..103886736 23/23 Antisense target bhlhe22.S
Chr1L:81858463..81858485 20/23 Antisense off-target atoh1.L
Chr1S:65862037..65862059 20/23 Antisense off-target atoh1.S
Chr3L:93355149..93355171 19/23 Sense off-target tnpo3.L
Chr3L:10277450..10277472 23/23 Sense off-target LOC121393056
Chr3L:10277450..10277472 23/23 Sense off-target LOC121400993
Chr3L:10488762..10488784 23/23 Antisense off-target LOC121393056
Chr3L:10581553..10581575 23/23 Sense off-target LOC121393056
Chr3L:10581553..10581575 23/23 Antisense off-target LOC121401053
Chr3L:10581553..10581575 23/23 Antisense off-target LOC121400999
Chr3L:10626487..10626509 23/23 Sense off-target LOC121393056
Chr3L:10658535..10658557 23/23 Antisense off-target LOC121393056
Chr3L:12594830..12594852 23/23 Sense off-target LOC121400994
Chr3L:12594830..12594852 23/23 Antisense off-target LOC121401009
Chr3L:13082899..13082921 23/23 Sense off-target LOC121400994
Chr3L:13082899..13082921 23/23 Antisense off-target LOC121400998
Chr3L:9784195..9784217 22/23 Antisense off-target LOC121393056
Chr3L:9784195..9784217 22/23 Antisense off-target LOC121400993
Chr3L:10499108..10499130 21/23 Sense off-target LOC121393056
Chr3L:12663016..12663038 21/23 Antisense off-target LOC121400994
Chr1L:122733014..122733036 19/23 unknown
Chr4S:74735066..74735088 19/23 unknown
tropicalis 10.0 Chr6:118213537..118213559 23/23 Antisense target bhlhe22
Chr1:211286206..211286228 20/23 Sense off-target kif24
Chr1:76932904..76932926 20/23 Antisense off-target atoh1
Publications
First:
Most recent:
View All Papers