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Summary Attributions Wiki
XB-GRNA-23659711
gRNA Name: pdx1 gRNA1
Synonyms: pdx1-T1
Genomic Target: pdx1

PAM Sequence: tgg
Sequence: 5' GGGCCAGCATTTCATTTTCT 3'



Genomic Target tropicalis
Identities 20/20
genome
gRNA
 
5' AGAAAATGAAATGCTGGCCC 3'
   ||||||||||||||||||||
3' TCTTTTACTTTACGACCGGG 5'
      
Genomic Alignments Position Identity Strand Target Genomic Target
laevis 10.1 Chr1S:16775860..16775879 18/20 Antisense off-target stk32b.S
Chr1L:136501308..136501327 17/20 Sense off-target ptprd.L
Chr1S:146558203..146558222 17/20 Antisense off-target rimbp2.S
Chr3L:76119810..76119829 16/20 Antisense off-target cped1.L
Chr4L:47094343..47094362 16/20 Antisense off-target vat1l.L
Chr5L:88768359..88768378 16/20 Sense off-target bach2.L
Chr6S:80509816..80509835 18/20 Antisense unknown
Chr2S:116569680..116569699 18/20 Sense unknown
Chr4S:105356400..105356419 18/20 Sense unknown
Chr2L:135403667..135403686 17/20 Antisense unknown
Chr6S:113680242..113680261 16/20 Antisense unknown
Chr1L:182861226..182861245 16/20 Sense unknown
Chr2L:19156205..19156224 16/20 Antisense unknown
Chr2S:72379764..72379783 16/20 Antisense unknown
Chr4S:96624801..96624820 16/20 Antisense unknown
Chr5L:125738967..125738986 16/20 Sense unknown
tropicalis 10.0 Chr2:155135614..155135633 20/20 Sense target pdx1
Chr2:118100820..118100839 17/20 Antisense off-target nalf1
Chr1:60157398..60157417 16/20 Antisense off-target il15
Chr4:103977984..103978003 16/20 Antisense off-target bcar3
Chr8:67589114..67589133 16/20 Sense off-target mbnl3
Chr2:114154689..114154708 16/20 Sense off-target gabrg3
Chr1:213535050..213535069 16/20 Sense off-target XB994119
Chr1:139239351..139239370 18/20 Antisense unknown
Chr10:36153581..36153600 17/20 Antisense unknown
Chr4:123446052..123446071 17/20 Sense unknown
Chr8:91798069..91798088 17/20 Antisense unknown
Chr3:102627525..102627544 16/20 Sense unknown
Chr5:88037053..88037072 16/20 Sense unknown
Chr8:79280029..79280048 16/20 Antisense unknown
Publications
???morpholino.displaySummary.papersFirst??? Efficient RNA/Cas9-mediated genome editing in Xenopus tropicalis., Development 2014     
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