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XB-PHENO-25129

Xla Wt + vegt + nog + cyp26a1 + CHX + animal cap explant, Gere-Becker MB et al. (2018)

Experiment + Assay: Xla Wt + vegt + nog + cyp26a1 + CHX + animal cap explant + animal cap NF12.5 (RNA-Seq (RNA))
Background: Xla.Outbred
Manipulations:
Manipulation Type Reagent Target Gene Stage Treatment Area
mRNA injection nog (Xla) nog (Xla)
 NF stage 2 (2-cell) blastomere
mRNA injection vegt (Xla) vegt (Xla)
 NF stage 2 (2-cell) blastomere
mRNA injection cyp26a1 (Xla) cyp26a1 (Xla)
 NF stage 2 (2-cell) blastomere
explant  
NF stage 8 animal cap
chemical cycloheximide
NF stage 11 embryo
Conditions:
Assay Type Assay Stages Antibody
RNA-Seq NF stage 12.5  
Expression Phenotypes (52):
decreased amount actc1.L expression in the animal cap
decreased amount ag1.S expression in the animal cap
decreased amount agr2.S expression in the animal cap
decreased amount atp2a1.L expression in the animal cap
increased amount atp2a1.L expression in the animal cap
increased amount bix1.1.L expression in the animal cap
increased amount bix1.1.S expression in the animal cap
increased amount bix1.2.L expression in the animal cap
increased amount bix1.3.S expression in the animal cap
decreased amount bix1.3.S expression in the animal cap
decreased amount dlx3.S expression in the animal cap
increased amount esr-5.L expression in the animal cap
decreased amount foxi1.S expression in the animal cap
increased amount hes1.L expression in the animal cap
increased amount hes1.S expression in the animal cap
increased amount hes3.S expression in the animal cap
increased amount hes4.L expression in the animal cap
increased amount hes4.S expression in the animal cap
increased amount hes5.1.L expression in the animal cap
increased amount hes5.2.L expression in the animal cap
increased amount hes5.3.L expression in the animal cap
increased amount hes5.4.L expression in the animal cap
increased amount hes5.4.S expression in the animal cap
increased amount hes5.5.L expression in the animal cap
increased amount hes5.5.S expression in the animal cap
increased amount hes5.6.L expression in the animal cap
increased amount hes5.6.S expression in the animal cap
increased amount hes5.7.L expression in the animal cap
increased amount hes5.7.S expression in the animal cap
increased amount hes5.8.L expression in the animal cap
increased amount hes5.8.S expression in the animal cap
increased amount hes5.9.L expression in the animal cap
increased amount hes7.2.L expression in the animal cap
increased amount hes7.2.S expression in the animal cap
increased amount lefty.L expression in the animal cap
decreased amount lefty.L expression in the animal cap
increased amount mesp2.L expression in the animal cap
increased amount mesp2.S expression in the animal cap
increased amount mespa.L expression in the animal cap
increased amount mespa.S expression in the animal cap
increased amount nodal1.L expression in animal cap
increased amount not.L expression in the animal cap
increased amount pitx2.S expression in the animal cap
decreased amount pitx2.S expression in the animal cap
increased amount rasd1.S expression in the animal cap
decreased amount rasd1.S expression in the animal cap
increased amount ventx2.1.L expression in the animal cap
decreased amount ventx2.1.L expression in the animal cap
increased amount ventx2.1.S expression in the animal cap
decreased amount ventx2.1.S expression in the animal cap
increased amount ventx2.2.S expression in the animal cap
decreased amount ventx2.2.S expression in the animal cap
GEO Series: GSE112718: Xenbase, NCBI
Article: XB-ART-54918, PubMed