Click here to close
Hello! We notice that you are using Internet Explorer, which is not supported by Xenbase and may cause the site to display incorrectly.
We suggest using a current version of Chrome,
FireFox, or Safari.
EFSA J
2023 Nov 01;21Suppl 1:e211005. doi: 10.2903/j.efsa.2023.e211005.
Show Gene links
Show Anatomy links
Toxicometabolomics as a tool for next generation environmental risk assessment.
Bernhard A
,
Poulsen R
,
Brun Hansen AM
,
Hansen M
.
???displayArticle.abstract???
Traditionally applied methodology in environmental risk assessment (ERA) has fallen out of step with technological advancements and regulatory requirements, challenging effectiveness and accuracy of the assessments. Extensive efforts have been focused towards a transition to a more data-driven and mechanistically-based next generation risk assessment. Metabolomics can produce detailed and comprehensive molecular insight into affected biochemical processes. Combining metabolomics with environmental toxicology can help to understand the mechanisms and/or modes of action underlying toxicity of environmental pollutants and inform adverse outcome pathways, as well as facilitate identification of biomarkers to quantify effects and/or exposure. This Technical Report describes the activities and work performed within the frame of the European Food Risk Assessment Fellowship Programme (EU-FORA), implemented at the section 'Environmental Chemistry and Toxicology' at the Department of Environmental Science at Aarhus University in Denmark with synergies to an ongoing H2020 RIA project 'EndocRine Guideline Optimisation' (ERGO). In accordance with the 'training by doing' principles of the EU-FORA, the fellowship project combined the exploration of the status of scientific discussion on methodology in ERA through literature study with hands-on training, using the metabolomics analysis pipeline established at Aarhus University. For the hands-on training, an amphibian metamorphosis assay (OECD test no.231) was used as a proof-of-concept toxicometabolomics study case. Both a targeted biomarker - and an untargeted metabolomics approach was applied.
Figure 1. Thyroxine (T4) concentrations in tissue of tadpoles exposed to three different doses of the test compound for 21 days or unexposed. The experimental groups are colour-coded to maintain experimenter blinding regarding the treatment until the analysis is concluded
Figure 2. Principal component analysis filtered by sample type. To validate stability and reliability of the analytical method used, a pool of all included samples (Quality Control (QC); dark blue circles) was injected repeatedly throughout the acquisition of tadpole samples (light blue circles). Solvent blanks (orange circles) were also included. Apart from an additional QC sample containing a mix of standards (also dark blue), the QC samples show close clustering.
Andersson,
Guidance for the identification of endocrine disruptors in the context of Regulations (EU) No 528/2012 and (EC) No 1107/2009.
2018, Pubmed
Andersson,
Guidance for the identification of endocrine disruptors in the context of Regulations (EU) No 528/2012 and (EC) No 1107/2009.
2018,
Pubmed
Ankley,
AOP Report: Adverse Outcome Pathways for Aromatase Inhibition or Androgen Receptor Agonism Leading to Male-Biased Sex Ratio and Population Decline in Fish.
2023,
Pubmed
Ankley,
Adverse outcome pathways: a conceptual framework to support ecotoxicology research and risk assessment.
2010,
Pubmed
Brockmeier,
The Role of Omics in the Application of Adverse Outcome Pathways for Chemical Risk Assessment.
2017,
Pubmed
Buesen,
Applying 'omics technologies in chemicals risk assessment: Report of an ECETOC workshop.
2017,
Pubmed
Cozigou,
The European Partnership for Alternative Approaches to Animal Testing (EPAA): promoting alternative methods in Europe and beyond.
2015,
Pubmed
Dang,
Amphibian toxicity testing for identification of thyroid disrupting chemicals.
2022,
Pubmed
,
Xenbase
Dang,
Endpoint sensitivity in Amphibian Metamorphosis Assay.
2019,
Pubmed
,
Xenbase
Danne-Rasche,
Nano-LC/NSI MS Refines Lipidomics by Enhancing Lipid Coverage, Measurement Sensitivity, and Linear Dynamic Range.
2018,
Pubmed
da Silva,
Mass Spectrometry-Based Zebrafish Toxicometabolomics: A Review of Analytical and Data Quality Challenges.
2021,
Pubmed
Fisher,
Xenbase: key features and resources of the Xenopus model organism knowledgebase.
2023,
Pubmed
,
Xenbase
Fowler,
Biomarkers in toxicology and risk assessment.
2012,
Pubmed
Gölz,
AOP Report: Thyroperoxidase Inhibition Leading to Altered Visual Function in Fish Via Altered Retinal Layer Structure.
2022,
Pubmed
Haigis,
Cross-species applicability of an adverse outcome pathway network for thyroid hormone system disruption.
2023,
Pubmed
Hansen,
Quantification of 11 thyroid hormones and associated metabolites in blood using isotope-dilution liquid chromatography tandem mass spectrometry.
2016,
Pubmed
,
Xenbase
Harrill,
Progress towards an OECD reporting framework for transcriptomics and metabolomics in regulatory toxicology.
2021,
Pubmed
Kramer,
Adverse outcome pathways and ecological risk assessment: bridging to population-level effects.
2011,
Pubmed
Marx-Stoelting,
A walk in the PARC: developing and implementing 21st century chemical risk assessment in Europe.
2023,
Pubmed
Matyash,
Lipid extraction by methyl-tert-butyl ether for high-throughput lipidomics.
2008,
Pubmed
Miccoli,
The use of NAMs and omics data in risk assessment.
2022,
Pubmed
Moné,
Setting the stage for next-generation risk assessment with non-animal approaches: the EU-ToxRisk project experience.
2020,
Pubmed
Pannetier,
Reversibility of Thyroid Hormone System-Disrupting Effects on Eye and Thyroid Follicle Development in Zebrafish (Danio rerio) Embryos.
2023,
Pubmed
Ravichandran,
Investigation of a derived adverse outcome pathway (AOP) network for endocrine-mediated perturbations.
2022,
Pubmed
Sostare,
Comparison of modified Matyash method to conventional solvent systems for polar metabolite and lipid extractions.
2018,
Pubmed
Sperber,
Metabolomics as read-across tool: An example with 3-aminopropanol and 2-aminoethanol.
2019,
Pubmed
van Ravenzwaay,
Metabolomics as read-across tool: A case study with phenoxy herbicides.
2016,
Pubmed
Viant,
Use cases, best practice and reporting standards for metabolomics in regulatory toxicology.
2019,
Pubmed
Villeneuve,
Adverse outcome pathway (AOP) development I: strategies and principles.
2014,
Pubmed
Zahn,
Normal Table of Xenopus development: a new graphical resource.
2022,
Pubmed
,
Xenbase